| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1176 |
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| Symbol | |
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| ID | 4602042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 1117508 |
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| End bp | 1118344 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639773952 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_920577 |
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| Protein GI | 119720082 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.698198 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATTA GGAGCCTAGC TCTGCACATG ATCGCTCTGG CAGTAGCTGT TATACCGCTA
GTGCCCCTCG TCCTACTGTT AGCGCTCGCA TTCAGCGAAA GCCAGGTTGA CATAAGGGGC
TTCACGCTGA GGAACTTCGA CTTTCTGAGA AACGGGGTTC TCTTCGCGGA GGATCCTGTG
TACAGCAAGC TCTACCCGAA TGTGTATACG GTAGCCTTCA ACACTTTCCT CCTCGCGCTA
GGAAACATGC TTATCGTAGT GTTGATATCC TCCATGGCTG GGTACATAAT CTCGAGGTAC
AGCTTCAAGG GTAGGAGCGC CCTCCTGGGA TCCTTCCTCG TCATACACGG CGTGCCGGCA
TCTGTTTTGC TGATTGCGCT GTACTACATG CTGAAATCCA TGGGTCTGCT CAATACTCTG
CTCGGAGTGG TACTCGTAAA GGTGGCCGTG GACCTGCCTC TTGGAGTCTG GGTGCTGAAA
GGCTTCTACG ACAGCATTCC GTGGGACATA GAGATAGCTA GCCTGGTAGA CGGCTCTAGC
AGGCTGGGCG CCTTCTTCCG CGTTATGCTA CCGCTCGTCA AGCCGGGGAT ATTCGCCGTG
GGTCTTTTCT CCTTCCTTAG CGGGTGGGGT GAGTACATCT TCGTGTACAC GTTCATCCAG
TCCTCGACGA ACTGGACGTT CTCGCTTCTA ATACGGAGCC TCATCGGGGA GATGGGAGGC
ATAAACCTCG CGCTGATAGC CGCGCTGAGC ATAATTTATC TAATACCAGT CATCGTGATA
TTCGTGGTCG GTGAAAAGTA CTTAGTGAGA GTCACGGTAG GCGGTGTAAA GGGGTGA
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| Protein sequence | MKIRSLALHM IALAVAVIPL VPLVLLLALA FSESQVDIRG FTLRNFDFLR NGVLFAEDPV
YSKLYPNVYT VAFNTFLLAL GNMLIVVLIS SMAGYIISRY SFKGRSALLG SFLVIHGVPA
SVLLIALYYM LKSMGLLNTL LGVVLVKVAV DLPLGVWVLK GFYDSIPWDI EIASLVDGSS
RLGAFFRVML PLVKPGIFAV GLFSFLSGWG EYIFVYTFIQ SSTNWTFSLL IRSLIGEMGG
INLALIAALS IIYLIPVIVI FVVGEKYLVR VTVGGVKG
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