Gene Tpen_1162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1162 
Symbol 
ID4601176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand- 
Start bp1101722 
End bp1102375 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content63% 
IMG OID639773938 
Productmetal dependent phosphohydrolase 
Protein accessionYP_920563 
Protein GI119720068 
COG category[R] General function prediction only 
COG ID[COG1418] Predicted HD superfamily hydrolase 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.031643 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTCCTGG AGGTAGTAGA GGGCGAGATG CTCAGGAGGG TCGCCGAGGA GGCTGTGAAG 
TTCTACAGAG GCTCGCACCA CGATCTCTCG CACGTGGAGA GAGTCTACAG GCTGGCGATG 
CGCATAGCCA GGGAGCTTGG CGCGGGGGTC GACCTGGAGG TTCTCGGAGC AGCCGCGATC 
CTGCACGACG TGGCTAGGTC CATGGAGGAC GAGGGGCTCG TCGAGGACCA CGCCCGGGAG 
GGGGCGAGGA TCGCCCGCGA GATCCTGAAG AGGGTGGGCT TCCCGGAGGA TAAGATCGAG 
AGAGTTGCGT ACTGCATCGA GGCGCACAGG TACAGGGGAG GCGGGAGGCC TTCCAGCATC 
GAGGCCCAGA TACTCCAGGA CGCGGACAGG CTTGACGCTC TTGGGGCTAT CGGGGTGGCA 
AGGGCCTTCG CGAGGGGAGG GGCTCGCGGC ACGCCCTTCT ACGACCCCTC TAAGCCCCCG 
AAGGAGAGGT ACGACGGACA TTCGGAGACC GTTGTCAACC ACTTCTACGA GAAGTTACTC 
AAGGTGAAGG ACACCCTGAA CACAGAGCCT GCGAGGAGGA TCGCCGAGGG TAGGCACAGG 
TTCATGGAGG AGTTCCTCGA GAGGTTCCTG AAGGAGTGGG TGGGGGAAGC CTAG
 
Protein sequence
MLLEVVEGEM LRRVAEEAVK FYRGSHHDLS HVERVYRLAM RIARELGAGV DLEVLGAAAI 
LHDVARSMED EGLVEDHARE GARIAREILK RVGFPEDKIE RVAYCIEAHR YRGGGRPSSI 
EAQILQDADR LDALGAIGVA RAFARGGARG TPFYDPSKPP KERYDGHSET VVNHFYEKLL 
KVKDTLNTEP ARRIAEGRHR FMEEFLERFL KEWVGEA