| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1155 |
|---|
| Symbol | |
|---|
| ID | 4602157 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | - |
|---|
| Start bp | 1094264 |
|---|
| End bp | 1096378 |
|---|
| Gene Length | 2115 bp |
|---|
| Protein Length | 704 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639773931 |
|---|
| Product | Kojibiose phosphorylase |
|---|
| Protein accession | YP_920556 |
|---|
| Protein GI | 119720061 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1554] Trehalose and maltose hydrolases (possible phosphorylases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.162173 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAGAAGT ACGCGTTTAG CGATAGGGAG AGGCCTATCA GGAAGATAGC CACGCTTACA
ACTCTCTCCA ACGGTTTTCT CAGCGTCCGC GGGGACCCGG AGACTGCGCC CTCGGAGTAC
GGCACGCTCG TTGCGGGAGT CTACAGCTAT ACGCCCATAT TCTACAGGGA GCTGGTCAAC
CTCCCGAGGA TAACCCCCGT ATACGTGGAG CTAGACGGCG TGCCCATGCT ACCCGTCCAG
GGTAGCAACG AGTTCCTCCT GGACGCGGAG GGAGGAACTC TGAGCTACAA GGCTATCCTT
GGGTCGAGCC TAGGCGAGCT GGAATACGAG AGCCTGAGGC TTACACACAA GAAGTTCAAA
GGTATATTCG CGCTACGGTA CCGCCTAGCC TCCCGCAACG CCGAGGGGCG CCTCTGCATC
AAACACCCCA TAGAGCTCGA TACCCTCAAC GTATCGTCTC CCCCGGAGGT CAAGGTGAAG
CTTTACAAAG TCGAGGAAGT ATCCGCCGAG GGCTCTTCCC CCTCGCTCTC CGTGAGAACA
GCCGACAATG CCTACAGGGT GCTCTACGCC CTGATAGTGA GAGGTAGCCC CGCAGAGCCT
AAGAGCTACT ACACGGGGAA GGAGGTCGGC TCCTGCTACT GTGTAGACGT GAAGCCGGGC
TCCGTGGTCG AAGGGGAAAA GGTTGTGATC GTCGCTCTCA GCAAGGAAGA GCTCGAAAAG
TTCAGGGGGA TCGCTACCTC GGAGAGCTTC GGTGGGCTTG TTTCTTCTCA TGTTGGTTTT
TGGAGGGGTT TGTGGGGTAG GGTTGGTTTT AGGCTTTACG GTGATTCTGC ACTGGAGGAT
GCACTTGTCT TTAACGCTTT CCACTTGCTA CAATTGTACA ATGAGGGTGG AGGGGAGTTT
ATGCTTCCAG CTAGGGGTTT ACACGGCTAC GGGTATAGAG GGCATGTTTT CTGGGACTCC
GACACCTACT CCCTACCATT CTACCTGCTA CTAGAGCCCG AGGCCGCTAG GAAGATACTG
GAGTACAGGT GTAGGTGTCT GGGCGCGGCT AGGGAGTACG CTTCCAGTAC AGGCTTTAGG
GGTGCTAGGT ACCCCTGGGA GGGTGTTGAT GACTGTAGGG AGGCTACACC CGTAGAGGTT
CCTTTAGACC TCGAGGGCTC CAGGAAGGCC TTCATAGAGA CTGGTAGGCT TGAACAACAC
ATAACTGCTG ACGTAGCATA CGCTGTAGAC ATGTACTACG AGTATACGGG TGACGAGGAG
TTCATGGAGA GGTGTGGTTT AAGGATTATA TTCGAGACTG CTAGGTTCTG GGCTTCGAGA
GTCGAGCTTG GTGGTGACGG CTACTACCAC ATCCGGGGCG TTATAGGCCC CGACGAGTAC
CACGTAGGCG TAGACGATAG TTTCTACACG AACGTAATGG CTAGGTACAA CCTCGTCCTC
GGCGCTAAGT ACTACGCTTT ATCCCAGTCT AAGCCTGGCT GGCTGAGGGT TGCCGTAGAG
GAGGGTGTGA GTAGAGAGGA GGCTGAGGGG TGGCTCGAGG TTGCCGGGAG GGTTAGGGTT
CCCTGCGAGC CGGGTGGTTT ATGCGAAGAG TTTGAGGGCT ACTTCAAGCT TAAAGACTTA
GAGGTTTCCA ACTGCTTCGG GGATTCCTGT GCTAAAGGCT TAGATGTGGG TTCTACTCGC
CTAGTTAAGC AGGCGGATGT TGTTGCTGGC TTGTTTTTGT TGAGGAGGTT TTTCGATAGG
AGGGTTTTAG AGGGGAACTA CGAGTACTAC TTGCGTAGAA CTACTCACGC ATCCTCGCTA
TCCCTACCTA TGTACGCGGC TATGGCTGCG TACCTGGGTA GAGTGGAGGA AGCTTTAGCG
TTGTTGAGGA AAGCTGCCTC CACAGACCTA GAGGATACTT ACGGAAACCT TGAAGACGGC
TTCCACGTAG CAGCAGCTGC AGGATCATGG ATGGCACTAC TACTAGGCTT CCTCGGGCTA
GAGCCCCGCG GCGGAAAACT GGTCGCGGAG CCACGCCTCC CGGAGGGGCT CGGCGTCGAG
CTAAACGTTT GGTTTAGGGG TAAGCTACAC AGAGTAGAGG CTAGGGGCTC CGAGTACAGG
ATAACTGAGC TCTAA
|
|---|
| Protein sequence | MKKYAFSDRE RPIRKIATLT TLSNGFLSVR GDPETAPSEY GTLVAGVYSY TPIFYRELVN
LPRITPVYVE LDGVPMLPVQ GSNEFLLDAE GGTLSYKAIL GSSLGELEYE SLRLTHKKFK
GIFALRYRLA SRNAEGRLCI KHPIELDTLN VSSPPEVKVK LYKVEEVSAE GSSPSLSVRT
ADNAYRVLYA LIVRGSPAEP KSYYTGKEVG SCYCVDVKPG SVVEGEKVVI VALSKEELEK
FRGIATSESF GGLVSSHVGF WRGLWGRVGF RLYGDSALED ALVFNAFHLL QLYNEGGGEF
MLPARGLHGY GYRGHVFWDS DTYSLPFYLL LEPEAARKIL EYRCRCLGAA REYASSTGFR
GARYPWEGVD DCREATPVEV PLDLEGSRKA FIETGRLEQH ITADVAYAVD MYYEYTGDEE
FMERCGLRII FETARFWASR VELGGDGYYH IRGVIGPDEY HVGVDDSFYT NVMARYNLVL
GAKYYALSQS KPGWLRVAVE EGVSREEAEG WLEVAGRVRV PCEPGGLCEE FEGYFKLKDL
EVSNCFGDSC AKGLDVGSTR LVKQADVVAG LFLLRRFFDR RVLEGNYEYY LRRTTHASSL
SLPMYAAMAA YLGRVEEALA LLRKAASTDL EDTYGNLEDG FHVAAAAGSW MALLLGFLGL
EPRGGKLVAE PRLPEGLGVE LNVWFRGKLH RVEARGSEYR ITEL
|
|---|
| |