| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1154 |
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| Symbol | |
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| ID | 4602156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 1093176 |
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| End bp | 1094210 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639773930 |
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| Product | transcriptional regulator, TrmB |
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| Protein accession | YP_920555 |
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| Protein GI | 119720060 |
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| COG category | [K] Transcription |
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| COG ID | [COG1378] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00116341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGGGAG CGGAGCTTAG CCTTAAGGAT CTCTACAGGC TTGCCGAGAG CCTTGGCCTG
AGAGAGTATG AGGCTAGAGC TTACATAGCC CTGGTTCTCT ACGGTTCAAT GACGGCTACA
GAGCTCGCTA AGAGGAGCGA GCTACCCCAG CCGAGGGTCT ACGACGTAGT GAAGGCGCTG
GAGGAGAAGG GCCTAGTAGC GATATCCGAG GGAAAGCCCA GGAAGTTCTC CGCGCTAGAC
CCCAGGGTGG CCTTGAAGAG GTACGTGGAG AGGAGGCACG CCGAGGAAAC GAGTACGCTC
AACTCCATAC TTAGGCTCCT GGAGTCGGCT AGCTTGAGGC GCGAGGAGCC GGGCGTGTGG
ACAGCTGTAG GGCAGAACGC CGGGGAAAGC CTCTTCCTCT CGGCTTTGGA ATCGGCCCGG
CACGAGCTCC TCGTGGCGGG CTACTCGAAG TTCCTCAGAG GGTTCCTGGA CAGGCTTGCG
AGGACTGATC TCGCGACGTG CCTAGTGCTC TACGACGGGG AGGACATAGG AAGCTTCGTA
AACGTGTTCG ACGAGGTCAG GCTGAGGCCT ACGAGGGCCC CCCAGATGGC GATACCGGAT
TTCTCCCAGG TAGTCATAGT CTCCGGCTGG GAGTCGGGGC AGGTAACAGC CTACAAGGTT
ACCGATGATA ACTTGATGAG GATTTTCGCC GTTTACTACC TCGACTACCT GCGCGGTAGC
GGCAAGGTAG TTGCAGCCAA GTTCGGTCAG CTCGAGCGGA GGACGTACCA CCACATGACA
AGGGCACTCG AGCACATCAA CGCGCTTCTA GGCGCCGGGC GGAAGCCCGT GCTTACCGTT
CGGGGCAGGT GGGTCGCCAC GGGGGAGGAG GCTACTGTAA GGGGGGTTCC CGTAAGGCTC
TTCGAGAACT CGTTCAGAAG CGTTGGTACA ATCCTCTTGA AGCTAGAGGA CGGAAGAGAG
GTCAGCGTGG GCGGAGTAGG AGCTTACCTG GAGGACGTGG AAGCCTACGA AATAACCGTT
GAGGCGCGGG AGTAG
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| Protein sequence | MEGAELSLKD LYRLAESLGL REYEARAYIA LVLYGSMTAT ELAKRSELPQ PRVYDVVKAL
EEKGLVAISE GKPRKFSALD PRVALKRYVE RRHAEETSTL NSILRLLESA SLRREEPGVW
TAVGQNAGES LFLSALESAR HELLVAGYSK FLRGFLDRLA RTDLATCLVL YDGEDIGSFV
NVFDEVRLRP TRAPQMAIPD FSQVVIVSGW ESGQVTAYKV TDDNLMRIFA VYYLDYLRGS
GKVVAAKFGQ LERRTYHHMT RALEHINALL GAGRKPVLTV RGRWVATGEE ATVRGVPVRL
FENSFRSVGT ILLKLEDGRE VSVGGVGAYL EDVEAYEITV EARE
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