Gene Tpen_1148 details

Gene Information

• Locus tag: Tpen_1148
• ID: 4600954
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermofilum pendens Hrk 5
• Kingdom: Archaea
• Replicon accession: NC_008698
• Strand: +
• Start bp: 1087269
• End bp: 1087790
• Gene Length: 522 bp
• Protein Length: 173 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 639773924
• Product: orotate phosphoribosyltransferase
• Protein accession: YP_920549
• Protein GI: 119720054
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0461] Orotate phosphoribosyltransferase
• TIGRFAM ID: [TIGR00336] orotate phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATAGAGG AGATACTCTG GGAGATAGGG GCTGTCAAGA CCGGGGAGTT CAGGCTGACC 
TCCGGGAAGG TTAGCAACGT GTACATCGAC CTCAGGAAGC TCCCGTCGCA CCCCCAGGCC 
TTCAGGAGGG TTGTCGAGGC CCTCGCCGCG GTAGCCAGAA CCATCGAGTT CGACGCCGTC 
TGCGGGATAG CGGTGGGAGG CCTACCCATA GCCACTGCCC TCGCGTACAC GCTGGGCAAG 
CCCTTGATCT ACGCTAGGCG CGAGAAGAAG GCCCACGGCA CCATGAAGCA ACTGGAGGGT 
GACTACGCGA GGGGTATGAA GGTGCTGCTA GTAGACGACG TAGCGACGAC AGGGGGGACG 
CTTCTCGACA TAGCAAGGCT CCTGAAGTCC GAGGGCTTAG AGGTGGTGGA GGCTCTCGTC 
GTGGTCGATA GGGAGGAGGG GGCATCCGAG GCCTTGAGGA GCGAGGGACT GAGGCTGAGG 
AGCCTCACGA CGCTCAAGAA GGTCCTCTCG GCTCGCGCGT AG 

 

Protein sequence

MIEEILWEIG AVKTGEFRLT SGKVSNVYID LRKLPSHPQA FRRVVEALAA VARTIEFDAV 
CGIAVGGLPI ATALAYTLGK PLIYARREKK AHGTMKQLEG DYARGMKVLL VDDVATTGGT 
LLDIARLLKS EGLEVVEALV VVDREEGASE ALRSEGLRLR SLTTLKKVLS ARA