Gene Tpen_1140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1140 
Symbol 
ID4601395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand- 
Start bp1077979 
End bp1079073 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content58% 
IMG OID639773916 
Productasparagine synthetase A 
Protein accessionYP_920541 
Protein GI119720046 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0017] Aspartyl/asparaginyl-tRNA synthetases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.304827 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGACAGG AAACCCGGTT TATCGCATTT AACAGTGCAC GCGAAAGTTT GGCAAAACTT 
CACCCGGCGG TGCTGGAGCT CGAGAAGATG GCTAGGGATA GGGATTCGTA CGTCAAGTTC 
CTAGAGGAGT GGACAAGGTA CTCGTGGAAG TGGGCTAGGG AAAGCAAGTA CGCCACGGTC 
TTCAGGATCC AAGCGTCGAT ACTCCGCGCT ATTCGAGAGT ACTTGGACTC CCACGGCTTT 
ACTGAGGCGT TGCCGCCGAT AATAGGTCCC GTCACTGACC CGGGCATAAG GGGGGCTAAG 
CAGGTTACCG TGGACTTCTA CGGGCACGAG TACAAGGTCA TGTCCAGCGC TATACTCTAC 
AAGCAGTACA TGGCGGCGGT ATTGGGTAAG GTCTACTTCG TCTCTCCGAA CATCAGGCTT 
GAGCCCAACG ACAGCATTTT CACGGGTAGG CACCTCGTCG AGTTCTTCCA GGTCGACATA 
GAGATTCTGG ACGGCACGCT GGAGGACGCT ATGAGCCTGG CCGAGGGCTT ATTCATGCAT 
GTTGCTAGGT ACGTCGAGGA GGTGCACGGC GCGGACCTCG AGAAGCTTGG TAGGACCCTC 
CCAGAGTACA GGACACCGTT CGCGAGGTAT ACCCACGCCG AGGCGGTGGA GCTGGTAAAC 
AGGCTGGGCT GTAGAAACCC GAGGAACACC GAGATCCTCT GGGAGTGCGA GAAGGTTCTA 
TCGGCCCACC ACACGAGCCC TCTGTTCATA TACGGGTATC CCAAGGGGTC TAGGGGCTTC 
TACAACAGGG AGGACCCGGA GAGGCCTGGC TACCTAAGGG ACTTCGACAT GCTTTACCCC 
GAGGGCTTCG GGGAGGCTAT ATCGGGAGGC GAGCGCGAGT ACGAGCCGGC CAAGGTTATC 
GCTAGGATAA AGGAGTCCGG GGAGGACCCG AAGAAGTACA AGTGGTTCCT GGAGATGCTC 
AGGGACTTCT ACCCCTTAAA GACGGCCGGC TTCGGCATAG GGGTGGAGAG GCTGACTAGG 
TACATATGCG GCCTTAGGGC TGTGTGGGAG TCTAGGCCGT ACCCCAAGGT CGCCGGGATA 
GGCCCAACCC CCTAA
 
Protein sequence
MGQETRFIAF NSARESLAKL HPAVLELEKM ARDRDSYVKF LEEWTRYSWK WARESKYATV 
FRIQASILRA IREYLDSHGF TEALPPIIGP VTDPGIRGAK QVTVDFYGHE YKVMSSAILY 
KQYMAAVLGK VYFVSPNIRL EPNDSIFTGR HLVEFFQVDI EILDGTLEDA MSLAEGLFMH 
VARYVEEVHG ADLEKLGRTL PEYRTPFARY THAEAVELVN RLGCRNPRNT EILWECEKVL 
SAHHTSPLFI YGYPKGSRGF YNREDPERPG YLRDFDMLYP EGFGEAISGG EREYEPAKVI 
ARIKESGEDP KKYKWFLEML RDFYPLKTAG FGIGVERLTR YICGLRAVWE SRPYPKVAGI 
GPTP