Gene Tpen_1116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1116 
Symbol 
ID4600858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp1053744 
End bp1054127 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content55% 
IMG OID639773892 
Producthypothetical protein 
Protein accessionYP_920517 
Protein GI119720022 
COG category[S] Function unknown 
COG ID[COG1504] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGTACA ACAATGATGT TTTCGTGGCG GCGGGGCAAC CATTGATAGA CGCGTACAAG 
TTTGGGCGCC TCGTTGTAGG CGGCAGGGCC TATGAGAGGG ATGTCATCAT AACTCCCTCG
GGCGTAGTGC CTAACTGGTG GAGACTCGAG GGTCATAGGC TCCAGCTGGA AGACGTGAAA
AAGTATCTTG GTCTCGATGT CGACGCGGTA GTGGTAGGCA CGGGGTACCA CGGCTTTATG
CGCGTGGACA GTGAGGTCGT CGAGAGTTTT AGGAGGATGG GTAGAGAGGT CTACGTGCTC
GAGACTGGTA GGGCTGTCGA GAAGTACAAC GAGCTTGTAG CTAGGGGTAG GAGGGTTCTC
GCGATGTTGC ATTTAACGTG TTAG
 
Protein sequence
MAYNNDVFVA AGQPLIDAYK FGRLVVGGRA YERDVIITPS GVVPNWWRLE GHRLQLEDVK 
KYLGLDVDAV VVGTGYHGFM RVDSEVVESF RRMGREVYVL ETGRAVEKYN ELVARGRRVL
AMLHLTC