Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_1101 |
Symbol | |
ID | 4600968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | - |
Start bp | 1039293 |
End bp | 1039979 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639773878 |
Product | HAD family hydrolase |
Protein accession | YP_920503 |
Protein GI | 119720008 |
COG category | [R] General function prediction only |
COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
TIGRFAM ID | [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.744434 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGGCG AGTGGATCGT GGTGTCCGAC TACGACGGTA CGCTGGCCGA GGAGAACAGA GAGGTGGAGC CCCGCGTCTT GGAGAAGCTC GAAGAGCTCA AAGCAAAGTA CCCCTTCAAG TTCGTTATAG CGACGGCGCG ACCCCTGGAG GACATATCGA GGTTCGTGGG TAAGCTCTGG CTCGTAGACG CGCTCATACT GGAGGTGGGC TCAGTCGTAG CGTTGCCCGA AGCATTGGAG GTTATATTCA AGCCGTGGGG GTGGGATAGG CTCCGGGCAG TACTCAGGGA AAGCGTACCG GCTGTAAACG AGGGGAGAGT GCTGTACTAC GTCGACGAGG AGGAACTCCA GGTAGCGGAG AGAGTTGCTA GGGAGAAGCT GGGAGCCTTC GGGTACGACC TCGCGAAGGT CGGCTCGCGG ACGTATGCGT TCATGCCTAG GGGCATCGAT AAGGGTGTGG GTCTCGAGAG GCTTCTCAAG CTGACTGGGT GGAGCGACGC CATGATAGTA AGCATCGGAG ATAGCCGCAC GGACCTACCG CTCTTCCAAA AGTCGAAGGT CAAGGTGGCC GTTGGGAACG CCGCGCGAGA AGTCAAGGAG AAAGCGGACA TAGTTTGCGA AGAGAAGTAC GGGGACTGCG TGGTAAGAGT AATCGAGGAG ATAGTTAACC GTATGAGCTA TAGCTGA
|
Protein sequence | MSGEWIVVSD YDGTLAEENR EVEPRVLEKL EELKAKYPFK FVIATARPLE DISRFVGKLW LVDALILEVG SVVALPEALE VIFKPWGWDR LRAVLRESVP AVNEGRVLYY VDEEELQVAE RVAREKLGAF GYDLAKVGSR TYAFMPRGID KGVGLERLLK LTGWSDAMIV SIGDSRTDLP LFQKSKVKVA VGNAAREVKE KADIVCEEKY GDCVVRVIEE IVNRMSYS
|
| |