Gene Tpen_1084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1084 
Symbol 
ID4601696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp1020266 
End bp1020751 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content63% 
IMG OID639773861 
ProductNADH-plastoquinone oxidoreductase subunit 6 
Protein accessionYP_920486 
Protein GI119719991 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAGCC TGTTGCTCGT ATACGTGTTG ATCTCGTGCG CCGTCGCGGT GGCGTCCTCC 
CTGCTCGCGG TGAAGGTGAA GGAGGACTTC TACGCCGCAG TACTGCTCGG CTTCGTTGGC
CTCTCGGTAG CCTCGCTGAT AGCACTGCTC GGCTTTACCT ACGTCGCCGT GTTCCACGCG
CTAGTCTACG TCGGCGCCAC GGTGCTCTTC GTGATAATGG GGGTGATATT CATAGGCAGG
GGGCTGGGCT ACGAGAGGAG GATGCTCGCC GCCGGGGTGC TCACATCGGT GTTTGCAGGC
TCCCTCTTCT ACTACGCGCT CCAGAGCTCC GCGGCCAGCG GGAGCCCCGC CCCCAGAGTC
GGCGTCGACC TGCAACAGCT CTCCCAGGCA GTCCTGCAGA ACCAGGTCGC CCTCGTCTTT
CTGGTGTTCG CCCTCGCCCT CCTCCTCGTC GCGGGTTTAC CCGTTGCTAG GGGTGATGCT
AGATGA
 
Protein sequence
MSSLLLVYVL ISCAVAVASS LLAVKVKEDF YAAVLLGFVG LSVASLIALL GFTYVAVFHA 
LVYVGATVLF VIMGVIFIGR GLGYERRMLA AGVLTSVFAG SLFYYALQSS AASGSPAPRV
GVDLQQLSQA VLQNQVALVF LVFALALLLV AGLPVARGDA R