| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1071 |
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| Symbol | |
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| ID | 4601649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 1009107 |
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| End bp | 1010720 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639773848 |
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| Product | NADH-ubiquinone oxidoreductase, chain 49kDa |
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| Protein accession | YP_920473 |
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| Protein GI | 119719978 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit
[COG3261] Ni,Fe-hydrogenase III large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGGGAG GTAGGATACA GGGTAAGGTT CAGGTTCCTC CCGAAGGCAT ACGGGAAGCT
GTTAGAAGGC TCGTCGCCGA AGGTTACGCT CACCTAACGG CGATAACGGC GGTCGACCTC
CAGGACTCCA TAGAGCTGAT ATACCACTTC GACGGGGGCG GCGGCTACAG ACACGTCTCC
GTGAAGCTAC CCAGGGCTAA CCCGACCCTT CCCTCCATCG CCCAGGTAGT CCCCGGCGCC
GACTACTACG AGAAAGAGGT ACGCGACTTG TTCGGCGTCA ACTTCCAGGA CGGCGCGGAG
AAGAGGCGCT TCATACTCCC GGAGTGCTAC CCGCCCGACG CGCCTCCCCC CTTACTAAAG
GACGTCGACC CTGCCTCGGT GAAAGCGCTA GTCGCCGAGG CGCCGACGTG CCAGGTTGAC
GCCGTGGGTT TGCACGCGCC TCTTTCCCCA GAAAGCGTGG TCGTACCCGT AGGCCCGTAC
CACCCGGCCT TCAAGGAGCC GGAGTACTTC AGCCTGGTGG TAGACGGGGA GAGGATAGTG
AAGGCCTTTG TACGCATAGG GTTCGTGCAC AGGGGTATAG AGAAGGCTGC GGAGTCTAGG
AGCTTCTTCA GGGACATCTT CCTCGTGGAG AGGATATGCG GGATATGCAG TACTTCCCAC
GCGTGGTGCT TCGTAGAGGC TGTCGAGAGG CTCTTAAACA TGGAGGTGCC CAGGAGGGCG
GCCTACCTTC GAACCCTCGT CGCGGAGCTG GAGAGAATAC ACTCCCACGC TCTCTGGCTG
GGCCTCGTGG GCTACTGGAC GGGCTTCGAG ACAATGTTCA TGTGGGTCTG GGGGCTCCGA
GAGACCATAA TGGACCTACT CGAGGAGATC TCCGGGAACA GGGTCCACAA GTCCTTCGTA
ACCATAGGCG GGGTGCGGCG CGACGTTCCC GACGCCCTGC TGAGACGCGT CTCCGAGAGG
GTTGAGACGT TCCGCAGGGA GTTCGAGTCC CTGCTTGAAA GCCTGTCGTA CTCCGAGGAG
ATAATCTCCA GGACGAAGGG GATAGGGAGG TACAGCCTGG ATGATGCCAG GAAGTACTGC
GCTGTGGGGC CTGTTAGGAG GGCTGCGGGA GACCCGTTCG ACGTGAGAAG AATAGAGCCC
TACGGGGCCT ACCCGGAGGT GGAATTCGAG GTCCCCACGT CCAACGAGGG AGACGTGTAC
AACCTCATTA GGGTCCGAGT AAAGGAGGTC GTAGAGTCGG CCAGCATAAT CCAGCAGTTG
GTCGAAAAGA TGCCTTCGGG CAACCCCGTA CCTCCTAAGC CGTTCATGGG CACGGTTCCC
GAGGGTGAGG CTTACAGCAG GATCGAGGCT CCGAGGGGCG AGCTGTTCTA CTACGTAAAG
GCGAATAACA CACACAACCC CTACAGGGTT AAGGTTAGAA CCCCGACCCT GGCGAACATC
CAGCTCGCGG CGAAGATCCT CGAGGGGCAG ACGCTGTCCG ACTTCCCAGT CGTCGTCACG
AGCATAGACC CCTGCTTCAG CTGTATGGAC AGGGTGACTA TAATCGACTT GTCCGGGAAG
AGAAGGGAAG TTTCTTCCAA GTTTTTCGAG TCGCTTAGAG GGGTGAGGAG ATGA
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| Protein sequence | MGGGRIQGKV QVPPEGIREA VRRLVAEGYA HLTAITAVDL QDSIELIYHF DGGGGYRHVS
VKLPRANPTL PSIAQVVPGA DYYEKEVRDL FGVNFQDGAE KRRFILPECY PPDAPPPLLK
DVDPASVKAL VAEAPTCQVD AVGLHAPLSP ESVVVPVGPY HPAFKEPEYF SLVVDGERIV
KAFVRIGFVH RGIEKAAESR SFFRDIFLVE RICGICSTSH AWCFVEAVER LLNMEVPRRA
AYLRTLVAEL ERIHSHALWL GLVGYWTGFE TMFMWVWGLR ETIMDLLEEI SGNRVHKSFV
TIGGVRRDVP DALLRRVSER VETFRREFES LLESLSYSEE IISRTKGIGR YSLDDARKYC
AVGPVRRAAG DPFDVRRIEP YGAYPEVEFE VPTSNEGDVY NLIRVRVKEV VESASIIQQL
VEKMPSGNPV PPKPFMGTVP EGEAYSRIEA PRGELFYYVK ANNTHNPYRV KVRTPTLANI
QLAAKILEGQ TLSDFPVVVT SIDPCFSCMD RVTIIDLSGK RREVSSKFFE SLRGVRR
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