Gene Tpen_1066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1066 
Symbol 
ID4601644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp1006032 
End bp1006493 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content55% 
IMG OID639773843 
Productnuclease 
Protein accessionYP_920468 
Protein GI119719973 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTGATC ATTTTTGTAG ACTTATGCAA GTTTATGTCG CAAAGATAGC TTTTATGAGC 
ATAGGTAGCC TGAAGCCCCA CGAGGAGTTC TCCGAGGAAA GAGTGGAGGA GCTTCTCCGC
GACATGCTCG AGAGGGGGGT GCTAATCAAG CCTATCGCTG CCGAGTCGAG GTACGGAGTG
ATCCTGGACG GCCACCACAG GGTGGAGGCG CTTAGAAGGC TCGGGGTGAA GGAGGTTCCG
GTCGCGCTGG TAGACTACGA CGACGAGCGC ATAGTCGTGC GGTCGTGGAG AGAGGGGTTT
AGCCCGTCGA AGAGAGAGGT TATCGAGAGG GCTCTTAAGG GGAGCCTGTA CCCCTACAAG
ACCACGAGGC ACGTGGTAGT CATAGACGGG AAGGAGCTCC ACATCTCGGA GGTCGTTCCC
AATGTGTACT ACAAGCTCAA GCCTCTGCTT GTACAAGATT AA
 
Protein sequence
MCDHFCRLMQ VYVAKIAFMS IGSLKPHEEF SEERVEELLR DMLERGVLIK PIAAESRYGV 
ILDGHHRVEA LRRLGVKEVP VALVDYDDER IVVRSWREGF SPSKREVIER ALKGSLYPYK
TTRHVVVIDG KELHISEVVP NVYYKLKPLL VQD