Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_1066 |
Symbol | |
ID | 4601644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | + |
Start bp | 1006032 |
End bp | 1006493 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639773843 |
Product | nuclease |
Protein accession | YP_920468 |
Protein GI | 119719973 |
COG category | [K] Transcription |
COG ID | [COG1475] Predicted transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTGTGATC ATTTTTGTAG ACTTATGCAA GTTTATGTCG CAAAGATAGC TTTTATGAGC ATAGGTAGCC TGAAGCCCCA CGAGGAGTTC TCCGAGGAAA GAGTGGAGGA GCTTCTCCGC GACATGCTCG AGAGGGGGGT GCTAATCAAG CCTATCGCTG CCGAGTCGAG GTACGGAGTG ATCCTGGACG GCCACCACAG GGTGGAGGCG CTTAGAAGGC TCGGGGTGAA GGAGGTTCCG GTCGCGCTGG TAGACTACGA CGACGAGCGC ATAGTCGTGC GGTCGTGGAG AGAGGGGTTT AGCCCGTCGA AGAGAGAGGT TATCGAGAGG GCTCTTAAGG GGAGCCTGTA CCCCTACAAG ACCACGAGGC ACGTGGTAGT CATAGACGGG AAGGAGCTCC ACATCTCGGA GGTCGTTCCC AATGTGTACT ACAAGCTCAA GCCTCTGCTT GTACAAGATT AA
|
Protein sequence | MCDHFCRLMQ VYVAKIAFMS IGSLKPHEEF SEERVEELLR DMLERGVLIK PIAAESRYGV ILDGHHRVEA LRRLGVKEVP VALVDYDDER IVVRSWREGF SPSKREVIER ALKGSLYPYK TTRHVVVIDG KELHISEVVP NVYYKLKPLL VQD
|
| |