| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1058 |
|---|
| Symbol | |
|---|
| ID | 4601444 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | + |
|---|
| Start bp | 997564 |
|---|
| End bp | 998667 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639773836 |
|---|
| Product | phosphate ABC transporter, periplasmic phosphate-binding protein |
|---|
| Protein accession | YP_920461 |
|---|
| Protein GI | 119719966 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0226] ABC-type phosphate transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR00975] phosphate ABC transporter, phosphate-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.204379 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCTAA CAAGTAGAGG AGCCGCGCTG ACCGTACTCC TAGTGGGGCT CGCGCTAGCG
GCGGTACTAT GGATAGGCTC GCAGCAGGCG CAGCGAGAGG TCCTCCTCAA GGGTAGCGGG
GCCACATTCC CCATGCCCCA GATACAGGCC TGGGCGTACA GGTTTACCTC GAAGCACCCC
GGCATCAAGA TCGAGTACGC CGGCGTAGGC TCGGGGCAGG GGATAAGCGA CTTCTTAAAC
GGCATCGTCG ACTTCGCGGG GAGCGATGTA CCACTCAACG ACCAGCAGTA CAGCGCCGCC
CGGAGCAGGT TCGGCGAGGT ATACCAGCTA CCTTACATCC TCGGCGGCGT GGCAGTGGTG
TACAACGTGC CTGAGATCAA GGGGGCAGGC AACCTCAGGC TTACCGGGGA GGTTCTTGCC
GACATACTGC TCGGCAAGAT AGCGTACTGG GACGACCCGA GAATAAGGGA GCTGAACCCC
GGCCTTAACC TGCCGCACAA GGAGATAGTA CTCGTGTACA GAAGCGACGC GAGCGGCACG
AACGAAGTCT TCACGAAGTA CTTGTCCTAC GTCTCGCCGG AGTGGAGGAA AACCGTGGGG
GCGGGTAAAA CCGTGCAGTG GCCCCTCGCA GGGCTCGGCC GCGCGGTGGG CGCGAAGGGG
AACCCCGGAG TAGCCCAGGC TGTGAACAGC ACGCCCTACG CTTTAGGGTA CGTGGAGCTC
GCGTACACGA AGGGCCTCGG CGTCGCGGCT ATAAGAAACA AGTCCGGAAA CTTCGTTCTA
CCGACACCGA GAAGCGTTAC GATCGCCGCC TCAGCCCTCC CAGCGCTCGA CCCCTCCTCG
AGCATAGCCG GCGTAAACTA CCTAGAGGCG ATATTCGGAA ACCCCGACCC AGACGCCTAC
CCCATATCCA CTCCCACCTT CCTGGTAGTC AAAGGCCCGA AGAACTACGA CCCCCCGAAG
GCTAAAGCCC TGGCACTCTT CCTAAAGTAC ATAGCCACGG AGGGTCAGAG CCCCGAGAGC
ATCGTAGAGG GCTATGCCCC CGTACCGCAG CAGTTGCGCG AAGCAATACT CAGGGTCGCC
GCCATCCTCG AGGCTGGGGG CTAA
|
|---|
| Protein sequence | MPLTSRGAAL TVLLVGLALA AVLWIGSQQA QREVLLKGSG ATFPMPQIQA WAYRFTSKHP
GIKIEYAGVG SGQGISDFLN GIVDFAGSDV PLNDQQYSAA RSRFGEVYQL PYILGGVAVV
YNVPEIKGAG NLRLTGEVLA DILLGKIAYW DDPRIRELNP GLNLPHKEIV LVYRSDASGT
NEVFTKYLSY VSPEWRKTVG AGKTVQWPLA GLGRAVGAKG NPGVAQAVNS TPYALGYVEL
AYTKGLGVAA IRNKSGNFVL PTPRSVTIAA SALPALDPSS SIAGVNYLEA IFGNPDPDAY
PISTPTFLVV KGPKNYDPPK AKALALFLKY IATEGQSPES IVEGYAPVPQ QLREAILRVA
AILEAGG
|
|---|
| |