Gene Tpen_1041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1041 
Symbol 
ID4600946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp981331 
End bp981795 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content60% 
IMG OID639773819 
ProductNUDIX hydrolase 
Protein accessionYP_920444 
Protein GI119719949 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.317547 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTGGATCG CTACTCTATG CTACCTGCTC AGGGGGGACG AGGTACTGCT TATACGCAAG 
CTAAGAGGAT TCGGGGCGGG GAAGTACAAC GGCGTCGGCG GGAAAGTCGA GGAAGGCGAG
GACATCTGGC GCGCCGCGAT GAGGGAGGTT CTCGAGGAGA CGGGGGTTGA GGTGAAGGGG
CTTTCCTACA GGGGTCTACT GGAGTTCTAC GCCGGCGGCG AGGAACCCGA GATAATCGTG
CACGTCTTCG TGTCCAGGGA TTTCGCGGGC GAAGCGAGAC CCTCCGATGA GGCTGTCCCG
ACGTGGTTCA AAGTGGGGGA GATACCCTAC GACGAGATGT GGGAGGACGA CAGGGTGTGG
CTTCCTCGGG TTTTGGAGGG GCGCTGCGTG TACGGTAGGT TCTGGTTCAG CGGGGGGTTC
GAGAAAATGC TTAGGTACGA GTTAAGCGTG TACGACGGGT GCTAG
 
Protein sequence
MWIATLCYLL RGDEVLLIRK LRGFGAGKYN GVGGKVEEGE DIWRAAMREV LEETGVEVKG 
LSYRGLLEFY AGGEEPEIIV HVFVSRDFAG EARPSDEAVP TWFKVGEIPY DEMWEDDRVW
LPRVLEGRCV YGRFWFSGGF EKMLRYELSV YDGC