Gene Tpen_1023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1023 
Symbol 
ID4601638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp966677 
End bp967624 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content63% 
IMG OID639773801 
ProductRad51-like 
Protein accessionYP_920426 
Protein GI119719931 
COG category[L] Replication, recombination and repair 
COG ID[COG0468] RecA/RadA recombinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.973197 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTATCC CTATTGAGGA GCTGGGGAAG GAGGAGGGCA TAGGGAGGGT CACGATCTCC 
AGGCTGAAGA GCGCCGGCAT AGAGACCGTG GAGGACCTCG TGCTCTACAA CCCGGAGGAG
CTCGAGGAGC TCGCCGGCAT AGACTTCGAG AGAGCGCTCA GGCTCGTGAG GACCGCTAGG
CGGCTGGCGG GCTGGGAGGT AAGGGCGGTG AGGGGCGACG AGTACGCCTC GCAACTCTCT
CAGCGGGAGT CCCTCACCAC GGGCGTTAAG GCGCTGGACG AGCTGCTAGA GGGGGGCCTC
GTAACCCAGG AGATCTACGA GTTCGCCGGG GAGTACGGGT CCGGGAAGAC CCAGCTCTGC
CACCAGCTGT CAGTCACAGC GCAGCTACCG CCGAGCCGGG GCGGTCTCGG CGGCAAGGTT
GTCTACGTGG ACACCGAGGG GACGTTTAGC CCGTCGAGGA TAGAGAGGAT CGCCGAGAGG
TTCGGCGTGG AGGGAGCGCT GGAGGGAGTC TACGTGGCGA GGCCTATCAG CGTCGACGAG
CTGGAGGAGC TCGTCATAAA GGGGTTGAAG CCGTTGCTCA AGGGCGGCGT GAAGCTCGTA
GTGATAGACT CTGTGATCGC GCTGTACAGG GCCCAGTTCA GGGGGCGCGA GTGGCTCGCG
ATGAGGCAGC AACGGATCAA CTACGCCTTG GACTGGTTGA AGAGGCTCGC CAGGGTCTAC
AGCATAGTAG TCGTAATCAC GAACCAGGTA GTCTCGGTCC CGAGCAACTG GGGCGTAGCC
GTGAAGCTAC CGGCGGGCGG CAACATAATC GCCCACGCCT CCACCCACAG GTTCCTCATG
AAGAAGGCGG GGGACTCGTG GCTGATCGAG GTTCTCGACT CGCCGAGGCT ACCCAAGGGG
GCGACGGCGC AGTTCGAGAT AAGGGACGAC GGTCTGGGTG ACGTTTAA
 
Protein sequence
MPIPIEELGK EEGIGRVTIS RLKSAGIETV EDLVLYNPEE LEELAGIDFE RALRLVRTAR 
RLAGWEVRAV RGDEYASQLS QRESLTTGVK ALDELLEGGL VTQEIYEFAG EYGSGKTQLC
HQLSVTAQLP PSRGGLGGKV VYVDTEGTFS PSRIERIAER FGVEGALEGV YVARPISVDE
LEELVIKGLK PLLKGGVKLV VIDSVIALYR AQFRGREWLA MRQQRINYAL DWLKRLARVY
SIVVVITNQV VSVPSNWGVA VKLPAGGNII AHASTHRFLM KKAGDSWLIE VLDSPRLPKG
ATAQFEIRDD GLGDV