Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_1023 |
Symbol | |
ID | 4601638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | - |
Start bp | 966677 |
End bp | 967624 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639773801 |
Product | Rad51-like |
Protein accession | YP_920426 |
Protein GI | 119719931 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0468] RecA/RadA recombinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.973197 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTATCC CTATTGAGGA GCTGGGGAAG GAGGAGGGCA TAGGGAGGGT CACGATCTCC AGGCTGAAGA GCGCCGGCAT AGAGACCGTG GAGGACCTCG TGCTCTACAA CCCGGAGGAG CTCGAGGAGC TCGCCGGCAT AGACTTCGAG AGAGCGCTCA GGCTCGTGAG GACCGCTAGG CGGCTGGCGG GCTGGGAGGT AAGGGCGGTG AGGGGCGACG AGTACGCCTC GCAACTCTCT CAGCGGGAGT CCCTCACCAC GGGCGTTAAG GCGCTGGACG AGCTGCTAGA GGGGGGCCTC GTAACCCAGG AGATCTACGA GTTCGCCGGG GAGTACGGGT CCGGGAAGAC CCAGCTCTGC CACCAGCTGT CAGTCACAGC GCAGCTACCG CCGAGCCGGG GCGGTCTCGG CGGCAAGGTT GTCTACGTGG ACACCGAGGG GACGTTTAGC CCGTCGAGGA TAGAGAGGAT CGCCGAGAGG TTCGGCGTGG AGGGAGCGCT GGAGGGAGTC TACGTGGCGA GGCCTATCAG CGTCGACGAG CTGGAGGAGC TCGTCATAAA GGGGTTGAAG CCGTTGCTCA AGGGCGGCGT GAAGCTCGTA GTGATAGACT CTGTGATCGC GCTGTACAGG GCCCAGTTCA GGGGGCGCGA GTGGCTCGCG ATGAGGCAGC AACGGATCAA CTACGCCTTG GACTGGTTGA AGAGGCTCGC CAGGGTCTAC AGCATAGTAG TCGTAATCAC GAACCAGGTA GTCTCGGTCC CGAGCAACTG GGGCGTAGCC GTGAAGCTAC CGGCGGGCGG CAACATAATC GCCCACGCCT CCACCCACAG GTTCCTCATG AAGAAGGCGG GGGACTCGTG GCTGATCGAG GTTCTCGACT CGCCGAGGCT ACCCAAGGGG GCGACGGCGC AGTTCGAGAT AAGGGACGAC GGTCTGGGTG ACGTTTAA
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Protein sequence | MPIPIEELGK EEGIGRVTIS RLKSAGIETV EDLVLYNPEE LEELAGIDFE RALRLVRTAR RLAGWEVRAV RGDEYASQLS QRESLTTGVK ALDELLEGGL VTQEIYEFAG EYGSGKTQLC HQLSVTAQLP PSRGGLGGKV VYVDTEGTFS PSRIERIAER FGVEGALEGV YVARPISVDE LEELVIKGLK PLLKGGVKLV VIDSVIALYR AQFRGREWLA MRQQRINYAL DWLKRLARVY SIVVVITNQV VSVPSNWGVA VKLPAGGNII AHASTHRFLM KKAGDSWLIE VLDSPRLPKG ATAQFEIRDD GLGDV
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