| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1017 |
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| Symbol | radA |
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| ID | 4601632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 962414 |
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| End bp | 963490 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639773795 |
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| Product | DNA repair and recombination protein RadA |
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| Protein accession | YP_920420 |
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| Protein GI | 119719925 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0468] RecA/RadA recombinase |
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| TIGRFAM ID | [TIGR02236] DNA repair and recombination protein RadA |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.103289 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTAAAC GCGCGAAAAC CGAGGAGGTA GAGGAGAAGG AGGAAAAGGT AGAGGAGGAA
GTAAACGTAG ACGAGCTAGT AGAGGATATC CTCGGCGAGG CCGCGGCGGA GGCCCCGCCC
GAGGAGGTAC CCGAGGGAGA GATAAGGCTG GAGGACCTTG AAGGCGTTGG AAGGATAACG
GCCCAGAAGC TCAGGGCGGC CGGGTTCTAC ACTGTTCGAG ACCTCGCGTT TGCCTCTGCC
CACGAGCTAG CGCTAGTCCT CGGCTCCGAG GAAAGAGCCA TGGCTATAAT CAGGTCTGCG
CAGAGGCTGG TGAACAGGGG AGAGGAGTTT ATAACCGCGA AGACACTGTT CGAGAAGAGG
AAGAACATCG AGTACATCAG TACTGGTGTT CGTAGTCTTG ATGATTTGCT TGAGGGTGGT
ATTGAGGTTG GTAGTATTAC TGAGTTTATC GGGGAGTTTG GTGCTGGTAA GACTCAGATA
TGCCACCAGC TCAGCGTGAT GGTCCAGCTG CCGAAGGATA AGGGAGGGCT CAACGCCAGG
GCACTGTACG TGGACACAGA GGGAACGTTC AGGCCCGAGA GAATAGTACA GATAGCAAGG
GCCAGAGGCC TAGACCCAGA AAAAACACTA GAAAACATAA TATACGCGAG AGCCTACAAC
AGCGACCACC AGATGCTTCT AATAGACGAG GCGAAGAAGT ACATCGAAAA GTACAACATC
AGGCTAATCA TAGTCGACAG CCTCATCAAC CACTTCAGGG CTGAGTACCC GGGCAGAGAG
AACCTCGCCT CGAGGCAACA GAAGCTCAAC AAGCATATAA GCCAGCTACA CAGGCTCGCG
AGCCTCTACA ACCTAGCGGT TGTCGTGACA AATCAGGTAA TGGCTTCGCC CGACATATTC
TTCGGAAACC CGCTGAAACC CGCCGGTGGA AACATAATGG CGCACGGGTG CACGTACAGG
ATCTGGCTTA GAAAAGCCAA GGAGGGTAAG CGCATAGCCC GCATAATCGA CAGCCCGAAG
CACGCAGAGA AAGAGGTAGC GTTCGCGATA ACGGAGGACG GAGTCACGGA CGTCTAG
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| Protein sequence | MPKRAKTEEV EEKEEKVEEE VNVDELVEDI LGEAAAEAPP EEVPEGEIRL EDLEGVGRIT
AQKLRAAGFY TVRDLAFASA HELALVLGSE ERAMAIIRSA QRLVNRGEEF ITAKTLFEKR
KNIEYISTGV RSLDDLLEGG IEVGSITEFI GEFGAGKTQI CHQLSVMVQL PKDKGGLNAR
ALYVDTEGTF RPERIVQIAR ARGLDPEKTL ENIIYARAYN SDHQMLLIDE AKKYIEKYNI
RLIIVDSLIN HFRAEYPGRE NLASRQQKLN KHISQLHRLA SLYNLAVVVT NQVMASPDIF
FGNPLKPAGG NIMAHGCTYR IWLRKAKEGK RIARIIDSPK HAEKEVAFAI TEDGVTDV
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