| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1001 |
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| Symbol | |
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| ID | 4601557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 948090 |
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| End bp | 948851 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639773779 |
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| Product | HhH-GPD family protein |
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| Protein accession | YP_920404 |
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| Protein GI | 119719909 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1194] A/G-specific DNA glycosylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.811853 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAAAGG TTTGGCTTTT TAAGGATTTT AGTTCAATTC CTCCCGGGGT TCGAGGGAAG
GCTTTTAAGG TCGAGGCGCG GTGCCCGAGC GTGGGCTACC GCGGGGAGGA GTACTTCGAG
GAAGTTGCCC GTAGGCTAGC GGAGTGGTAC AGGAGGAGGG GGCGCGACTT CCCGTGGAGG
CACACCAGGG ACCCCTACGT CATCCTCGCG ACGGAGTTCC TGCTCCAGCG CACGAGGGCG
GAGACTGTCG CGAAGGTCTT CGAAGAGTTC TTCTCCAGGT ACCCGTCCCC CGAGAGCCTC
GCTAACGCGG ACCCCGAGGA GCTGAGGAAG TTCTTCTCGA GGCTGGGCCT AGTGAGGCGC
GCCGACGCCC TCAGGGAGGC GGCGAGGGAG ATCGTGGAGA GGCACGGCGG CTCCGTGCCG
CGCAGCAAGG AGGAGCTCCT CAAGCTCAAG GGCGTTGGGC CCTACATAGC CTCCGCTGTC
CTCTGCTTCG CCTACTCAGC CCCGGTACCC GTTGTGGACA CGAACGTCGA GAGAGTGCTG
GGCAGGGCGG CGGGCGCCTC CTCCCGAGAG GAGGCCGAGG CGTTCCTGGA GAGGCTCCTG
CGGCACGGAA ACCCCAGGGA GATCTCCCTG GCGCTCATAG ACCTCGGAGC CCTCGTCTGC
ACCAGGAAGC CAAAGTGCCC CGAGTGCCCG CTCAGCGACC TGTGCTCCTA CCGCGGCTCC
GGGAGACCGG GGGCTCAGTG CGCCGGCGGG GCTTCCCGGT AA
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| Protein sequence | MRKVWLFKDF SSIPPGVRGK AFKVEARCPS VGYRGEEYFE EVARRLAEWY RRRGRDFPWR
HTRDPYVILA TEFLLQRTRA ETVAKVFEEF FSRYPSPESL ANADPEELRK FFSRLGLVRR
ADALREAARE IVERHGGSVP RSKEELLKLK GVGPYIASAV LCFAYSAPVP VVDTNVERVL
GRAAGASSRE EAEAFLERLL RHGNPREISL ALIDLGALVC TRKPKCPECP LSDLCSYRGS
GRPGAQCAGG ASR
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