| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0985 |
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| Symbol | |
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| ID | 4601961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 934943 |
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| End bp | 937384 |
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| Gene Length | 2442 bp |
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| Protein Length | 813 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639773763 |
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| Product | helicase domain-containing protein |
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| Protein accession | YP_920388 |
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| Protein GI | 119719893 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1061] DNA or RNA helicases of superfamily II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.033377 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTATCCC TGATTGAGAT ACTGAGGTCT GCCGGCAAGG ATCTCTACAA GCACCAGCTC
GACTTTGTGT CTGATGCTCT GTGGTTTGAC GAGCCCCGTA TTCTCTTGGC TGACGACGTA
GGGCTGGGTA AAACAATCCA GGCTCTCCTC TACATTAAGG CTCTCCTCGA GCTGGGGAGG
GTGAACCATG TTCTAGTAAT AGTGCCTCGT GCTGTCGTGG AGCAGTGGGC ATCTGAGCTG
GAGATGTTCG AGATACCATT CTACATCGTG GAGTCGCCTG ACTTCCCGCT GGGACACAGG
GTCTACCTAG TCACCCTGGA TAGAGCTAAG GTGGACAGCT ACATGGAGGC TTTGGACAAG
ATAAACTGGG ACTTGGTAGT TGTTGATGAG GCTCACAAGC TGAGGCTAGA GACGCTCAGG
TCTAAGGTGG CTATTCTGTG TAGAAGGGCG AGGGGATGTC TTTTACTCAC TGCTACTCCG
CATACGGGCG ACGAGAGTAG CTTCAAGTTC CTGATAGGAC TCGCGAACAG CTATGTTGTA
CGGCGTGAAA AGAAGGATGT GGAGGAGTAT GAGGGGCGCA AGATATTCCC GTCTTTGGGG
TACTGGATAG TGCAAGTGAA AGCAACGAAA GAGGAGAGTG ACGCGCTTCA TAAAGTGCTT
AAATTCCTGG AAAACGATCA GATAGAGCAG ATTGTGCGCG TAGTAGTGGA GAAGAGGGCG
ATGTCGAGCC CAACAGCGTT TTTCAAGACA CTCGGAAAGG TTGTAGGAGG GTATTGCAGC
GAAGAGTTAC TGGAAGAGGG GGAGCTCGAT GCCTGCATTG GTAACGTTGC CGGTGTAAAG
AAGCTTGAGG AGCTCGCAAA GAAATATGCT AGCGCTGCCG ACAGGAAGTT GGATGCTCTC
GAAAAGTTGC TGAAGGATCA CCTCAAGGGG AGAAAAGTAC TTGTCTTCAC AGAATATGCG
ACTACCGCCG AGTACCTATT TGAGAAGCTT GTTGAGAAGC TTGAGGGTTG TAAGATCGTA
GATAGTGGGG AGGGCTACGC AAAGGCTGAC TGTAGCGAGT TTGGAGTTAT GTATGTTACA
GCTAAGGCTA GGGACAGGAT TGACGTAAGC AGGGAAGGCG CGCTCCTAGC GTCCGCGTAT
CCTACAGCTG TACTTATATC CACGGACATA ATGTCCGAGG GCGTAAACCT CCAGGCTTTC
GATGTTGTTG TTAACTACGA GGTTGTATGG AGCCCGACAA AGCATGTGCA AAGGATAGGT
AGAATCTGGA GGTTTGGACA GAAGGCAGAG AAAATACTAG TTATCGACAT GGTTCTAAAG
ACTACTCTCT CGCAGGACGA ATACAGCAAC TATTTGACTT TGTTGGAGAA ATTGTACGAG
ATATCTCTCG CTGCCCTACC ACCCCAGAGC TACGGCGAGT TCGAGATCTA TGAGGTCGAC
CAAGAGCTCA GGAAGATAGT GGAGATAGGG TCTTCGGCTT ATCTAGGAGA GGAGGAGGTC
TACGAGGCTT TAAGGTCTGG TAGGCTGGAG GACCTGCGGA GCAGGATAAA GCGGATTCTC
AAAGCTAAAG AGAACATGAG GTGGAAGAGC AGGAATGAGG TGGATGAGGG TTTACGCGTA
AAGCTTGGCT ACCCACCGGA GAAGAAGCCG GAGCCCGGGG GAGGATACTA TGTTGCCAAC
GTTACTTTTG AGCGTAACGG AGTGAAGCTT TACTCCGAGC GTATACTCCT AAGGTTGCCA
ACACCGCTGA GTAGAAGTAG GTCGGTACAG GAGGGGGTCT TCAGAGAGCT GGAAGTTCCC
TGGGATGCAG TAGTAGAGGA TACTGGGTCG CTCAAGGAAG ACGAGAGAGA GGAGGTTAAT
CGTATGGTGT GGATCGAGGT ATGGCATCCA CTGCAGCAGT ACCTTTCAAG AAACAACCTT
CCCGAAGGTG GTATTAACGT AGAAGTAAAA CGTGCAAGGG TAGAGTCTAT AGGGGTTGCA
GAGCTAATAC CCGTTACCTT GAGCTTCGAG GAGCTTGTCG AGAGAGAAGT GAGGTACAGT
AGGAACAGGG AGCGCACAGA AAGGGCTGCT GCTAGATGCA TCAGGAGTTT ACTCGAAAAT
CTGGGCTATA CAATTGTGGA GGAATATGCG AGTATTCCTC GACCCTTCGA CATGGTGGTG
AAAAAGGACG GCATTCTTTA CACGGTGGAA GTCAAAGGTA AATGGGTTGG GAAGCGTGAT
GAACCGTTAT CCTTCACTGC GAATGAGATT GACTGGGCTT CGAGGTTCCC AGATAGGCAC
ATTGTGTGCA TAGCATACGT GGACAGAGAT TACTGTGAAG ACGTGGAGTG CTACTACTTC
AATGAATTTC AGAAGAAATG GGTTCTGGAA ACTGTGAGAG GAATAGAGTA CAAGTATAAC
GCTAGGAAAA AAAAGGGAGC CGACAAAACC GAACCTCAAT AG
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| Protein sequence | MVSLIEILRS AGKDLYKHQL DFVSDALWFD EPRILLADDV GLGKTIQALL YIKALLELGR
VNHVLVIVPR AVVEQWASEL EMFEIPFYIV ESPDFPLGHR VYLVTLDRAK VDSYMEALDK
INWDLVVVDE AHKLRLETLR SKVAILCRRA RGCLLLTATP HTGDESSFKF LIGLANSYVV
RREKKDVEEY EGRKIFPSLG YWIVQVKATK EESDALHKVL KFLENDQIEQ IVRVVVEKRA
MSSPTAFFKT LGKVVGGYCS EELLEEGELD ACIGNVAGVK KLEELAKKYA SAADRKLDAL
EKLLKDHLKG RKVLVFTEYA TTAEYLFEKL VEKLEGCKIV DSGEGYAKAD CSEFGVMYVT
AKARDRIDVS REGALLASAY PTAVLISTDI MSEGVNLQAF DVVVNYEVVW SPTKHVQRIG
RIWRFGQKAE KILVIDMVLK TTLSQDEYSN YLTLLEKLYE ISLAALPPQS YGEFEIYEVD
QELRKIVEIG SSAYLGEEEV YEALRSGRLE DLRSRIKRIL KAKENMRWKS RNEVDEGLRV
KLGYPPEKKP EPGGGYYVAN VTFERNGVKL YSERILLRLP TPLSRSRSVQ EGVFRELEVP
WDAVVEDTGS LKEDEREEVN RMVWIEVWHP LQQYLSRNNL PEGGINVEVK RARVESIGVA
ELIPVTLSFE ELVEREVRYS RNRERTERAA ARCIRSLLEN LGYTIVEEYA SIPRPFDMVV
KKDGILYTVE VKGKWVGKRD EPLSFTANEI DWASRFPDRH IVCIAYVDRD YCEDVECYYF
NEFQKKWVLE TVRGIEYKYN ARKKKGADKT EPQ
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