| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0951 |
|---|
| Symbol | pheT |
|---|
| ID | 4601291 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | + |
|---|
| Start bp | 903759 |
|---|
| End bp | 905429 |
|---|
| Gene Length | 1671 bp |
|---|
| Protein Length | 556 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639773729 |
|---|
| Product | phenylalanyl-tRNA synthetase subunit beta |
|---|
| Protein accession | YP_920354 |
|---|
| Protein GI | 119719859 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
|---|
| TIGRFAM ID | [TIGR00471] phenylalanyl-tRNA synthetase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCAGTGG TCGAGGTTAA GCTCTGGGAC CTCGAGCGGC TGACGGGCGC GAGCCTCGAC
GAGTCCACCG TGCGGGACCT GCTCCCCAGG CTCAAGTGCG AGGTAGAGGA GGTCAGCGGC
GAGGACGTAG TCTACGAGGC GACCCACGAC AGGCCCGACC TCTACTCCGC CGAGCTGCTA
TCGGTCTACC TCAAGGGGCT CCTCGGAGTC GAGGATGGGT TGCCGAGGCC CCGCGTGGGG
TCGGCGGAGG GGGTAGCCGA GGTGGAGGGC CCCGCCTACA GGCCGTACGC CTTCTTCGCC
GTGGTGAGGG GTGTGTCCCT GGACGACGAG GCGATAAGGC AGCTCATGCA GCTCCAGGAG
AAGGTGCACC TCACCTACGG GAGGAACAGG AGGAAGGTCT CGATAGGGCT GTACGACCTC
GACGGGATAA AGTTGCCCGT TAGGTACGTC GCGGCTAGCC CGGAGACGAG GATGAAGCCC
CTCGGCTTCG CGATCGAGAT GACGCTCAGG GAGGTCCTCG AGAAGCACCC GAAGGGCGTG
GAGTACGGGC ACCTCGTGAA GGGGCACGGG GAGTACCCGC TCATAGTGGA CGCGGAGGGC
AAGGTTGTGA GCTTCCCGCC GATAACGAAC AGCGAGGACT TCAGGGTCAC GGAGTCCACG
AGGGACGTCC TCATAGACGT TACGTCCACA GACCCGGAGG CTGGGAGGAG GATAATCTCC
CTCTTCGCCC ACGCGGTCGC CGTGAGGGGC GGCGAGGTAC GCCCGCTGAG GCTCAAGGGA
GCCTTGGACG AGGAGTCCCC GAGGATGGAG CCGGAGGAAG TCGTGTACGA CGTGTCGATG
AACAGGGACC TCCTGGGCCT CGACCTGGGG GTAGAGGAGA CCGTGAGGCT GCTCAGGGCC
ATGAGGATGG ACGCGGAGCC CGCGGGCAAC GGTAAGGTGG CGGTCAGGTA CCCGTACTTC
AGGGTAGACA TACTGCACCC CGTCGACATA GCCGAGGAGG TAGCGATGGG CTACGGCTAC
GAGCGCATAG AGCCCGCTGT GATCCCGCCG CTCCACCCGG GCAGGGAGGA CCCCATCGAG
GTCTTCACGA GGGCGCTCAG GGAGGGGATG GTCGGGCTAG GCTTCGTGGA GGTCAACAAC
TACATGATGA CTAGCGCCTC CCTGATGTTC GACGCGATGC TCCTGCCGAG GCAGCCGATA
GTAGAGGTCG AGAACCCGAG GCACGAGGCC TACCACGCGC TGAGGACGTG GATAGTCCCC
CAGCTACTCA GGCTCATGTC GAGCAGCAAG CACGCCGGCT ACCCCCAGAG AGTGTTCGAG
GCGGGCGACG TCGCGATACC GGACGAGTCG AGGGACAACA GGGTCCGGGA GGAGAGGCGC
CTAGCCTTCG CAGTGGCCGG GAAGGGCGTC ACGCTCACAG ACGGCTTAGC GGCTCTAAAG
GGGCTCTTCA GGCAGCTCGG GGTGAGCTTT AAGCTCGAGA AAGCCGAGCA CCCGAGCTTC
ATCGCCGGCA GGGTTGCGCG CGTAGTGACA GAGGCGGGGG ACGCCGGCAT AGTCGGCGAG
GTACACCCAC AGGTCCTCGT GAACTTCGGC TTAGAGGTGC CCGTGGTCGC CGGCGAGCTC
AACGTCGAGG TGGTCATGAA GTGCTACCTG GCCAGGCTTG GAGGGGCGTA G
|
|---|
| Protein sequence | MPVVEVKLWD LERLTGASLD ESTVRDLLPR LKCEVEEVSG EDVVYEATHD RPDLYSAELL
SVYLKGLLGV EDGLPRPRVG SAEGVAEVEG PAYRPYAFFA VVRGVSLDDE AIRQLMQLQE
KVHLTYGRNR RKVSIGLYDL DGIKLPVRYV AASPETRMKP LGFAIEMTLR EVLEKHPKGV
EYGHLVKGHG EYPLIVDAEG KVVSFPPITN SEDFRVTEST RDVLIDVTST DPEAGRRIIS
LFAHAVAVRG GEVRPLRLKG ALDEESPRME PEEVVYDVSM NRDLLGLDLG VEETVRLLRA
MRMDAEPAGN GKVAVRYPYF RVDILHPVDI AEEVAMGYGY ERIEPAVIPP LHPGREDPIE
VFTRALREGM VGLGFVEVNN YMMTSASLMF DAMLLPRQPI VEVENPRHEA YHALRTWIVP
QLLRLMSSSK HAGYPQRVFE AGDVAIPDES RDNRVREERR LAFAVAGKGV TLTDGLAALK
GLFRQLGVSF KLEKAEHPSF IAGRVARVVT EAGDAGIVGE VHPQVLVNFG LEVPVVAGEL
NVEVVMKCYL ARLGGA
|
|---|
| |