| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0937 |
|---|
| Symbol | |
|---|
| ID | 4601066 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | - |
|---|
| Start bp | 888884 |
|---|
| End bp | 889360 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639773715 |
|---|
| Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
|---|
| Protein accession | YP_920340 |
|---|
| Protein GI | 119719845 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.153792 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTCAGGC GTAGCGGCGT AGTCTCGGCT GGAGAGCTGG AGTCGATGGG GCTCGTTCCC
CCCAGGGAGA GGCTGATCAG GGGGGCGGTC GCGGTCACCG AGTGCATCGA GGAGATACCC
TGCAACGTTT GCGAGTCGGC GTGCCCGGTG AAGGCTATCA GGGTCGAGGG GCTCAGGGGT
AGGCCGAGGA TAGACTGGGA CAGGTGCACG GGGTGCGGTG TATGCGTGGG TGTGTGCCCG
GGGCAGGCGA TGTTCTTGTT GGACCTCAGC AGGGGGGCGG CGGTAACCGT TCCCTACGAG
TTCCTCCCGA GGCTCAGGAG GGGGGACACC GTCGAGCTGC TGGACAGGGA GGGCAGGGTG
GTGGGCGAGG GCACTGTTAT CAGGGTGTTC GAGGTGAACA AGACGCAGGT GGTAACGGTG
AGTGTCCCCG AGAACCTCTT GATGGAGGTG AGGGCGGTAC GCCGGGCGGC GAGATGA
|
|---|
| Protein sequence | MFRRSGVVSA GELESMGLVP PRERLIRGAV AVTECIEEIP CNVCESACPV KAIRVEGLRG
RPRIDWDRCT GCGVCVGVCP GQAMFLLDLS RGAAVTVPYE FLPRLRRGDT VELLDREGRV
VGEGTVIRVF EVNKTQVVTV SVPENLLMEV RAVRRAAR
|
|---|
| |