Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_0930 |
Symbol | |
ID | 4600753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | - |
Start bp | 876564 |
End bp | 879230 |
Gene Length | 2667 bp |
Protein Length | 888 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639773709 |
Product | ATP-dependent helicase |
Protein accession | YP_920334 |
Protein GI | 119719839 |
COG category | [R] General function prediction only |
COG ID | [COG1201] Lhr-like helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.960036 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCTGGGA AGGCGATCTC CTTCGCCACG AGGGAGTACA GCAAGGAGGA AGTGTTGAGG GTACTTGACC CCCTCGTCGC GGAGTGGTTT TCCGGGAAGT TCGAGGACTT GACGCCGCCG CAACGCTACG CGCTCATACC TATCCACGAG GGGAAGAACG TCCTGGTGTC GAGCCCCACG GGGACCGGGA AGACCCTGAC TGCTTTCCTC ATAGCGTTGA GCGAGCTCTT CGGCATGGCT AGGAGAGGCG AGCTGGAGGA CACAGTGTAC GTCGTCTACG TCTCGCCCCT CAGGGCGCTG AACAACGATA TCTACAGGAA CCTCGAGGAG CCTTTGAGGG AGATAAGGGA GCTCGCCGAG AAGAGGGGGC TGGAGATCCC CGAGATTAGG CACATGGTTA GGACGGGCGA CACGTCGAGC TCCCAGCGAC AGAGCATGCT CCGCAAGCCT CCACACATAC TGATAACGAC CCCGGAGACC CTTGCGATTA TTCTCGTCGC GCCGAAGTTC AGGGAGAAGC TTAGGAGCGT TAAGTGGGTC ATCGTGGACG AGATACACAG CCTCGCCGAG AACAAGCGCG GGGTTCACCT AGCCTTGTCG CTCGAGAGGC TCCGCGAGCT AGTGGGGAGG GACTTCGTGA GGATAGGGTT ATCGGCGACC ATAAACCCCC TCGAAGAGGT CGCGCAGTTC CTGGTGGGGT ACAACGACGA CGGGAGCCCG AGGGAGTGCG TGATAGTCGA CGCCAGGTAC GCCAAGAGGA AGACCCTGAG GGTGGTCTCC CCCGTCCCCG ACCTCGTCCA CACCCCGGCG CAGGAGGTCA CCGCGAAGCT CTACGAGACT CTCTACGAGA TCGTGAGGAA GCACAGGACC ACCCTGATAT TCACGAACAC TAGGAGCGGC ACGGAGAGGG TAGTCTTCCA CTTGAAGCAG TTAGCGAGGA AGAGGGGCGA CATACCCGAG GATGCTATAG CGGCGCACCA CAGCTCGCTT AGCCGCAACG TCAGGCTGGA CGTCGAGGAG AAGCTGAAGA GGGGCGAGCT CAGGGCGATA GTCAGCAGTA CGAGCCTGGA GCTCGGGATA GACATAGGCT ACATAGACGT CGTCGTCCTG GTCGGCTCCC CGAAGTCCGT TACCCGCGCG CTACAGAGGA TAGGTAGGAG CGGCCACAGG CTTCACGAGA CGAGTAAGGG TGTCTTCGTC TGCGTGGACA GGGACGACCT CGTGGAGGTA GCCGTGATGA CGAGGGAGGC TTACAGGCAC CACTTAGACA GGGTCCACAT ACCGAGGAAT GCCCTAGACG TCCTGGCGCA GCACCTGGTC GGGATGGCTA TAGAGAGGAA GATGAGCGCG GAGGAGGCGT ACAGGATAGT GAGGAGGAGC TACCCCTACA GGGACCTCCC GTGGGAGGAC TTCGAGAACG TATTAAAGTT CCTCTCAGGA GGGTACGGGG AGCTGGAGGA GTACAAGGTC TACGGGAAGA TATGGTACGA CCCCGAGGAG AAGGTCTTCG GGAGGAGGGG GAAGTACGCG CGCGTGATCT ACACGCTGAA CGTCGGGACG ATCCCCGACG AGGTGAGCGT GAAGGTCCTG ACCCTCGACA GGAAGTACGT GGGCAACATC GAGGAGGAGT TCCTCGAGAG GCTGATGCCC GGGGATAGGT TCGTGCTCGG CGGGAAGGTG TACGAGTTCG TCAAGAGCGA CGGGCTCACG GCGTACGTGA AGCCCGCGTA CGAGCAGAAG CCCACGATAC CCGCATGGTT CAGCGAGATG CTACCCCTCA GCTACGACCT CGCTGTCCGC ATAGGGGAGT TCAGAGGACA GGCGTTCGAG TGGATCTCGA AGCCGGGGGG CCTGGAGAGG CTCAAGGAGT ACCTGAAGAG GGAGTGCAAG GTCAACGAGG AGGGGGCCGA GGCTGTGGCT GGCTACTTCC TGGAGGAGTA CCTGTTTCTG CGGTCCCTCG GCGTGGAGAA GTTCCCGAGC GACAGGGTCG TGCTGGTCGA GAGGTACAGG GACGCTGACG GCAGGGTGCA CCACGTCTTC CACACGCTCT TTGGGCGCAG AACCAACGAC GCCTTGAGCC ACGCGCTCGC GTACCTAGCG TCTAAGAGGG CTGGGGCGAA CATAGGCATA GCTGTGCACG ACAACGGGTT CGCGCTGATA TACCCTCCGG GCGTGGAGCC GCAGGTATCC CTCATGGACG TGGCGCCCAG CGAGCTGGAG GATATCCTGA AGAAGGCGGT GTTCAACACC GAGCTCATGA GGCGTAGGTT CCGCCACGTG GCTACCCGCG GCTTAATGAT ACTCCGCAAC TACAAGGGGC ACGAGATAAG CGTCGAGAAA CAACAGCTGA GCGCAGGCAC CCTGCTCAGG GTTATAAGGA AGTGGGAGGA CTTCCCGATA CTCAAGGAGA CGTTCAGAGA GATACTCGAG GACTACATGG ACATAGCGCA CGCCAGGGAG GTTCTCGAAA AGGTGCACAG CGGCGAGATA GAAGTCGTGG ACATAGGGCT TCTTGACACG CCCACTCCGT TCGCCTACAA CATAATCCTC GAGGGGCTCA GCGACGTCGT ATTAATGGAG GATAAGCGCG CACTCATCGC GAAGTTCCAC GAAGAACTAA TGAGAAAAAT AGCCAGAGCA AAAGCTCAGG CGCAAGCCGC GCGCTAG
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Protein sequence | MSGKAISFAT REYSKEEVLR VLDPLVAEWF SGKFEDLTPP QRYALIPIHE GKNVLVSSPT GTGKTLTAFL IALSELFGMA RRGELEDTVY VVYVSPLRAL NNDIYRNLEE PLREIRELAE KRGLEIPEIR HMVRTGDTSS SQRQSMLRKP PHILITTPET LAIILVAPKF REKLRSVKWV IVDEIHSLAE NKRGVHLALS LERLRELVGR DFVRIGLSAT INPLEEVAQF LVGYNDDGSP RECVIVDARY AKRKTLRVVS PVPDLVHTPA QEVTAKLYET LYEIVRKHRT TLIFTNTRSG TERVVFHLKQ LARKRGDIPE DAIAAHHSSL SRNVRLDVEE KLKRGELRAI VSSTSLELGI DIGYIDVVVL VGSPKSVTRA LQRIGRSGHR LHETSKGVFV CVDRDDLVEV AVMTREAYRH HLDRVHIPRN ALDVLAQHLV GMAIERKMSA EEAYRIVRRS YPYRDLPWED FENVLKFLSG GYGELEEYKV YGKIWYDPEE KVFGRRGKYA RVIYTLNVGT IPDEVSVKVL TLDRKYVGNI EEEFLERLMP GDRFVLGGKV YEFVKSDGLT AYVKPAYEQK PTIPAWFSEM LPLSYDLAVR IGEFRGQAFE WISKPGGLER LKEYLKRECK VNEEGAEAVA GYFLEEYLFL RSLGVEKFPS DRVVLVERYR DADGRVHHVF HTLFGRRTND ALSHALAYLA SKRAGANIGI AVHDNGFALI YPPGVEPQVS LMDVAPSELE DILKKAVFNT ELMRRRFRHV ATRGLMILRN YKGHEISVEK QQLSAGTLLR VIRKWEDFPI LKETFREILE DYMDIAHARE VLEKVHSGEI EVVDIGLLDT PTPFAYNIIL EGLSDVVLME DKRALIAKFH EELMRKIARA KAQAQAAR
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