Gene Tpen_0929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0929 
Symbol 
ID4600752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp876034 
End bp876567 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content60% 
IMG OID639773708 
Producthypothetical protein 
Protein accessionYP_920333 
Protein GI119719838 
COG category[S] Function unknown 
COG ID[COG3601] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCATCCC CCGTGAACCG CACGGCTAAA CTGTCTTTAA CGGCATTAAC GGCTGCACTA 
GCGCTGGCGT TCTCCGTTCT CAAGCTAGAG GCGCCCTTCC CCGTCCTACC GTACCTGAAG
TTCGACCTGG CGGAGGTTCC CGTTACTCTC GGCTTCCTGC TCTGCGGCCT GCCTTACGGT
GTAGCGGCGG AAACCGTGCA CTTCCTCGGG CTCGTAGCGA GAGGCGCCGA CCCCCTGGGG
GCGTTCATGA AGTTCCTGGC CGTGGTATCC ATGTTCCTCG GCGCGTATAG GTTCTCCTCG
GCTGTCACCA GGCTCGCCTT GGGGGTCGCT GCACGCGTAG CCGCGATGAC CCTGGCGAGC
TACGCTTACT TCTACCTGCT GTTCCCCGGC TTTCTGGGCT ACGCTTTGAA GTACACTGGA
AGCGTCTACG CGCTGTTCGC TTACACCGCG CTATTCAACG TGATTCACGG AGCAGCAACG
ATGGCTCTCT CTATGCTCGT GGTCCGGGAG GTCAAGAAGA GGGTTAGGAT CTAG
 
Protein sequence
MPSPVNRTAK LSLTALTAAL ALAFSVLKLE APFPVLPYLK FDLAEVPVTL GFLLCGLPYG 
VAAETVHFLG LVARGADPLG AFMKFLAVVS MFLGAYRFSS AVTRLALGVA ARVAAMTLAS
YAYFYLLFPG FLGYALKYTG SVYALFAYTA LFNVIHGAAT MALSMLVVRE VKKRVRI