Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_0929 |
Symbol | |
ID | 4600752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | + |
Start bp | 876034 |
End bp | 876567 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639773708 |
Product | hypothetical protein |
Protein accession | YP_920333 |
Protein GI | 119719838 |
COG category | [S] Function unknown |
COG ID | [COG3601] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCATCCC CCGTGAACCG CACGGCTAAA CTGTCTTTAA CGGCATTAAC GGCTGCACTA GCGCTGGCGT TCTCCGTTCT CAAGCTAGAG GCGCCCTTCC CCGTCCTACC GTACCTGAAG TTCGACCTGG CGGAGGTTCC CGTTACTCTC GGCTTCCTGC TCTGCGGCCT GCCTTACGGT GTAGCGGCGG AAACCGTGCA CTTCCTCGGG CTCGTAGCGA GAGGCGCCGA CCCCCTGGGG GCGTTCATGA AGTTCCTGGC CGTGGTATCC ATGTTCCTCG GCGCGTATAG GTTCTCCTCG GCTGTCACCA GGCTCGCCTT GGGGGTCGCT GCACGCGTAG CCGCGATGAC CCTGGCGAGC TACGCTTACT TCTACCTGCT GTTCCCCGGC TTTCTGGGCT ACGCTTTGAA GTACACTGGA AGCGTCTACG CGCTGTTCGC TTACACCGCG CTATTCAACG TGATTCACGG AGCAGCAACG ATGGCTCTCT CTATGCTCGT GGTCCGGGAG GTCAAGAAGA GGGTTAGGAT CTAG
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Protein sequence | MPSPVNRTAK LSLTALTAAL ALAFSVLKLE APFPVLPYLK FDLAEVPVTL GFLLCGLPYG VAAETVHFLG LVARGADPLG AFMKFLAVVS MFLGAYRFSS AVTRLALGVA ARVAAMTLAS YAYFYLLFPG FLGYALKYTG SVYALFAYTA LFNVIHGAAT MALSMLVVRE VKKRVRI
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