Gene Tpen_0926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0926 
Symbol 
ID4600749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp872745 
End bp873527 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content61% 
IMG OID639773705 
Productphosphoesterase, putative 
Protein accessionYP_920330 
Protein GI119719835 
COG category[R] General function prediction only 
COG ID[COG1407] Predicted ICC-like phosphoesterases 
TIGRFAM ID[TIGR00024] putative phosphoesterase, SbcD/Mre11-related 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTCGCA CGAGCGTCTT GGAGGTTCCC CGCCTCCGGC TACGCAGGGG GCTGGAAGTT 
GTAGGCTATG GTCTCTACGT AGAGGAGCTG GGGAGCCTCC TTGTCGCGGA TCTCCACGTG
GGCTACGAGG GGGCGCTGGC GGAGCAGGGG GTGTTCGTTC CGCCTCTCCA GGCGAGGGAG
ATGAAGGAGG CCTTAGCCGC CATGATTGGC GAGAGCGGCG CCGAGAGGGT GATAATACTG
GGGGACGTGA AGCACGAGTT CGGCGACGTT ACGCGGCAGG AGTGGCGCGA GACTATAGAC
CTCCTCGAGT ACTTGAAGAG GGGGCTCGGT GTGAGGGTGG ACGTTGTGAG GGGGAACCAC
GACAACTACC TCGTCGTCGT CTTGAAGAGG CTCGAGATAC CGTTTCACGA CCCCTACCTG
CTGGAGGGTG ATTGGCTGTT CATCCACGGG CATAAGCCCT TCCCGGTCGA GGGGTTCAGG
GAGGACGTAC GGTTCGTGGC GATGGGGCAC GAGCACCCCG CCCTCGCCCT GCGGGACAGC
CTGGGTGTAA AGGTGAAGCT GAAGGCTCTC CTGGAGGGGT CCTACACAGG AAAGCAGGTG
TACGTGCTAC CCGCCCTCAG CCCCCTCATG CCGGGAACAG AGGTGAACGT TGAGAGATCC
TTCCTCTCTC CCCTCCTCAG GGAGACGGGC GTAGACGAAT ACAAAGCATA CGGGGTCGAC
CTTGAAGCCG GGATATTCGA CTTCGGAGAA GTGAAGTACC TGAGAAACGT CTCAGAACAG
TGA
 
Protein sequence
MARTSVLEVP RLRLRRGLEV VGYGLYVEEL GSLLVADLHV GYEGALAEQG VFVPPLQARE 
MKEALAAMIG ESGAERVIIL GDVKHEFGDV TRQEWRETID LLEYLKRGLG VRVDVVRGNH
DNYLVVVLKR LEIPFHDPYL LEGDWLFIHG HKPFPVEGFR EDVRFVAMGH EHPALALRDS
LGVKVKLKAL LEGSYTGKQV YVLPALSPLM PGTEVNVERS FLSPLLRETG VDEYKAYGVD
LEAGIFDFGE VKYLRNVSEQ