Gene Tpen_0916 details

Gene Information

• Locus tag: Tpen_0916
• ID: 4600812
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermofilum pendens Hrk 5
• Kingdom: Archaea
• Replicon accession: NC_008698
• Strand: +
• Start bp: 863150
• End bp: 863713
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 639773695
• Product: RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
• Protein accession: YP_920320
• Protein GI: 119719825
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0127] Xanthosine triphosphate pyrophosphatase
• TIGRFAM ID: [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTGTAT ACGTGGTAAC CGGGAATGTG CACAAGGTAG CGGAGCTCTC CCTAGCGCTT 
AAGCCCTTCG GCGTCGAGCT GGAGCCCCTC CGCGCAGAGA AGCTCGAAGT ACAGTCCGAG 
AGCCTCGAGA AGATAGCCCT CGTAGCGGCG GAGCACCTGC CGCCCCTCGA CAAGCCGGCC 
ATAGTCGAGG ACGCGGGGCT CTTCGTGAAG GCTCTCAACG GCTTCCCCGG CCCCTATAGT 
AGCTACGCCT ACAAGACGAT AGGCTGCAGG GGGTTGCTGA AGCTCATGGA GGGCGTCTCC 
GACAGGGAGG CAGTCTTCAG GTCCGTCATA GCCCTCAGAA TGCCGGACGG CTCGATACAC 
CTCTTTAAAG GCGAGGCGGC GGGCGTGATA ACAGAGGAGG AGAGGGGCAC TGGGGGCTTC 
GGCTTCGACC CCGTGTTCCG GCCGCGCGGC TCCGAGAAGA CATTCGCCGA GATGACGACC 
GAGGAGAAAA ACCTGTACTC GCACAGGGCT AAAGCCGCGA GAAACCTGGC CGAGTGGCTA 
GTGAGGCGCG CTAAGGGTAT TTGA 

 

Protein sequence

MRVYVVTGNV HKVAELSLAL KPFGVELEPL RAEKLEVQSE SLEKIALVAA EHLPPLDKPA 
IVEDAGLFVK ALNGFPGPYS SYAYKTIGCR GLLKLMEGVS DREAVFRSVI ALRMPDGSIH 
LFKGEAAGVI TEEERGTGGF GFDPVFRPRG SEKTFAEMTT EEKNLYSHRA KAARNLAEWL 
VRRAKGI