| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0905 |
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| Symbol | |
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| ID | 4602228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 853558 |
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| End bp | 854214 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639773684 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_920309 |
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| Protein GI | 119719814 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGGTTTAC TGGACTTCGT GTACGAGTAT ACGCCTTTCA TAGCGGAAGG CGTTGTCGTC
ACCCTGCAGA TATCGGTGAT ATCGTTCCTG CTGGGGCTAG CGCTCGGCAT AGCGCTTCTA
GGACTGAGCC TCACGAGCCT CCGGCCGCTG GCCAGGATGT ACATCGAGCC TGTGAGGGGG
ACACCCCTAC TAGTACAGCT ACTCCTGATC TACTTCGGGC TACCCTCGAT CGGGATAAAG
CTGGACGCGT TCACTTCCAG CTTTCTCGCG CTTGGGCTGA ACAGCGCCGC GTATCAGGCC
GAGATCTTTA GGTCTGCGCT GAAGAGCATC CCCGATGTGC AGATACTATC GGCAGAGTCG
CTGGGGTTCT CCGGGTCCCA GGTTTACAGG TACGTCATAC TTCCCCAGGC CCTTCGGATC
TCGATACCCT CCTTGGTCAA CGAGTTCGTG ACGGTAGTAA AGGAGAGCTC GCTCGCCTCG
GTTATAGGCA TAGTCGAGCT TACGAGGAGG GGCGAGTACG TCGCCGCGTA TACCTACAGG
GCGCTTGAAT CCTACCTGGT CGTAGCGGCT ATCTACTTCG CCGTGTGCTA CCTGATATCC
TACCTCTCGA GGAGGATAGA GGAGAAGATA AGAATACCCG GCTACACGGG TGCCTGA
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| Protein sequence | MGLLDFVYEY TPFIAEGVVV TLQISVISFL LGLALGIALL GLSLTSLRPL ARMYIEPVRG
TPLLVQLLLI YFGLPSIGIK LDAFTSSFLA LGLNSAAYQA EIFRSALKSI PDVQILSAES
LGFSGSQVYR YVILPQALRI SIPSLVNEFV TVVKESSLAS VIGIVELTRR GEYVAAYTYR
ALESYLVVAA IYFAVCYLIS YLSRRIEEKI RIPGYTGA
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