Gene Tpen_0892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0892 
Symbol 
ID4600468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp840043 
End bp841713 
Gene Length1671 bp 
Protein Length556 aa 
Translation table11 
GC content58% 
IMG OID639773670 
Producthypothetical protein 
Protein accessionYP_920296 
Protein GI119719801 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTTCT CCAGCTCTCT CCAGTTTTTC GTCCTCTTCG ACCTGCGGGG CGCTTCCCAC 
GGAGGCGAGG AACCCTTGAT CGCGTCTAAC GCTTCGACGA GGCGCGCCTC GTACAGCTCG
TCGCCCTTAA GAGTGCTCGC CAGGATACGC GAGGGGGCGC TTATCGCCCG CACGGTAACC
CTCGAGCGCG CCCTCGCAGG GGCGCCCCCT CCACCATTTA AGGAAAGGTT AAGTATGGTT
GGAGAGAAGA TGATGAGGAA TGAAGAGGTC GAGAAGGTTG TTAGGGAGGA GGTTTGGAGG
CGTGCGGCTT TAAGCCTCTA CGCCACCAGA ACAGAGGATA AGAGGAAAGC CAGGGGCGGG
AAGAAGGGCG AGATACACTA CCGCGGCCTG TATGACACTG TGAGCGAGGT TGACTGGGAC
TTCACTAGGT TCCTCATAAA CGGGTACAGC GTCGTGCCGG ACGAAGTCTA CCCGAGGTTT
CACCGCTTCA TAGACATCGA CGCGAGGAAG TACCTTCTAC TGAACGACGA CAGCAAGCCG
AGAGAGGGAA GCGCTGTCGT AGAGCTACGC GATAGGCTAC AAGCAATCGT CGACGCTACC
GAAGACGGCC TCAAAGTTGA GAGACACGGC AGAGTCTGGC ACGTTTACGT GCCCGGCGAA
AACTGGTACG TAACTGTCTC GAGGCCCAAC GCGAAGAGCT GGAGGGTGCG CGTACCACTG
GAAGGCTTCT GGGTTGAATC GGAGTTTCCC AAGGTTCTAG TGAATACTCC GAGCGATGTT
CTCAGAAGCC TGCAGAAAGG GTGGCTTCTC ACAGATGTCA CTCCGCCGCA CGGGCGCATC
AGCGACGTAC ATTTCAGCAC AACGCAGAGC TGGCAGTTGC CAGCGACGCT CGCCAGCTTC
CCGGGAGAAG TCAGGCTCGG CGTCACGGCG GGCATTCTCG GCAGTACTAG GCTGAGCATC
CAGTGGCAGG CGCGCGTTGA CGGTTACGAG GAGGAGCTGG GCTGGGCCTC CGAGCTCATC
GGCGAGGTTA AACGTGCAGA GTTTCGTCAG CTCGTCGAGA GGTGTAAGGA GCTTAACGGT
GACTCGGTGG CGCTGACGAC CGCCTTCCTG GGGGACGGCG AGCTCGAATT CTTCCTAAAG
CTTCGGGTGC TCTTCTTCAA GGTTGGACAT GAAGACATCT ACTTGCCGGC GGAAAGCGCT
ATAGCTAATG CCCGCTTAGC CGTGGAGAGA GCTAGCGAGT ACGTGCGCTT TGTCTCGCTG
GTAACTAAGT GTCCAAAGAT TAAACACTTC CTCTTCGTCG GCTACGGATT GCCGCAGAAG
AGAGGTAAGA AGGACGGCCA AAGAAATAAC CCGTTCTACG CCGAGGTGGC AGGGGCGCAG
CTACACCTTG TCTACATCTC TACGAGGAAC CACGTCTACG CTAGAATCGC AGTCGAAGCT
GTGCCTTCGG GCTGGGTGGA GGAGGCACGC GCTCAAGGCT GGGACGTCCG AGTGGTTCGA
ATGGGTGGCA GGGAGTACTA CCAGGTCACT CATGCTTCTT TGATGGAGCA TGCCTGTCAC
GACGAAGCAC TGCGTATAAC ACTCCTCGCC TTCACGAAGT ACAAGGCCGA GCGATACCCC
AAGGCGCAAA GCCTCGTAGA ACGCCTCGAA AAACTGGGGA CAGAAGACTA A
 
Protein sequence
MSFSSSLQFF VLFDLRGASH GGEEPLIASN ASTRRASYSS SPLRVLARIR EGALIARTVT 
LERALAGAPP PPFKERLSMV GEKMMRNEEV EKVVREEVWR RAALSLYATR TEDKRKARGG
KKGEIHYRGL YDTVSEVDWD FTRFLINGYS VVPDEVYPRF HRFIDIDARK YLLLNDDSKP
REGSAVVELR DRLQAIVDAT EDGLKVERHG RVWHVYVPGE NWYVTVSRPN AKSWRVRVPL
EGFWVESEFP KVLVNTPSDV LRSLQKGWLL TDVTPPHGRI SDVHFSTTQS WQLPATLASF
PGEVRLGVTA GILGSTRLSI QWQARVDGYE EELGWASELI GEVKRAEFRQ LVERCKELNG
DSVALTTAFL GDGELEFFLK LRVLFFKVGH EDIYLPAESA IANARLAVER ASEYVRFVSL
VTKCPKIKHF LFVGYGLPQK RGKKDGQRNN PFYAEVAGAQ LHLVYISTRN HVYARIAVEA
VPSGWVEEAR AQGWDVRVVR MGGREYYQVT HASLMEHACH DEALRITLLA FTKYKAERYP
KAQSLVERLE KLGTED