| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0890 |
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| Symbol | |
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| ID | 4600466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 837532 |
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| End bp | 838914 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639773668 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_920294 |
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| Protein GI | 119719799 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1350] Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) |
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| TIGRFAM ID | [TIGR01415] pyridoxal-phosphate dependent TrpB-like enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAAA AATACTTCCT AGACGAAGAG GAGCTACCGA GGGAGTGGTA CAATATACTA
CCAGACCTGC CCGAGCCCCT ACCGCCACCG CTGAACCCCG CAACCGGGAA GCCCGTCTCG
CCAGAAGACC TTGAACCCAT ATTCCCCAAG GAGCTTATCA GGCAGGAGGT ATCGCAGGAG
AGGTTTATCC CGATACCCGA AGAGGTACTC GAGGTGTACA GGATATGGAG GCCTACCCCC
CTCATCAGGG CCACCAGGCT GGAGAAAGCC CTCAGGACCC CTGCGAGGAT CTACTACAAG
TACGAAGGGG TATCGCCCCC AGGGAGCCAT AAGCCGAACA CGGCTGTCGC GCAGGCGTAC
TACAACGCGC GCGAAGGCGT GGCGCGCCTC ACGACGGAGA CCGGGGCTGG GCAGTGGGGA
AGCGCTTTAT CGTTCGCGAC CATGCTGTTC GGGCTCAAGC TTACGGTGTA CATGGTGAGG
GTGAGCTACC AGCAGAAGCC CTACAGGGCT ATACTGATGC AGACTTGGGG CGCCGAGGTC
GTCCCGAGCC CCAGTAACAG GACTAAGGCG GGCAGGGCTT TCCTCGAGAA GGACCCCGAG
CACCCCGGCT CTCTCGGTAT AGCGATCAGC GAGGCGCTGG AAGACGCAAT AGAGCACGAG
GACACGAAGT ACAGCCTGGG TAGCGTGCTA AACCACGTGC TGCTCCACCA GACGATCATA
GGGCTCGAAG CCATCAAGCA GATGCAGGCG CTCGACGAGT TCCCCGACAT AGTGATAGGC
TGTGTGGGCG GTGGGAGCAA CTTCGCGGGA ATATCGTACC CCTTCTACTA CCTGGTGCGT
AGCGGGAAGG CACCGAAGAA GACGAGGTTC CTCGCCGTGG AGCCTGCGTC CTGCCCCTCC
ATGACCAAGG GAGAGTACAT GTACGACTTC GGCGACACGG CGAGGCTTAC ACCGCTCCTA
AAGATGTACA CGCTGGGACA CGACTTCGTG CCACCGCCGA TTCACGCCGG CGGACTACGT
TACCACGGCG CGGCTCCAAC CCTAAGCCTT CTCAAAAAAG CGGGGATCTT CGAGAGCGTT
GCCTACAACC AGGTGGAAGT CTTCGAGGCG GCGAGGCTCT TCGCCCGGAC GGAGGGCATA
GTGCCTGCTC CTGAGAGCGC CCACGCCATA AAGGCGGTCA TCGACGAGGC CCTAGAGGCT
AAGAGGAAGG GCGAGGAAAA GGTCATACTC TTCAACCTGA GCGGGCACGG GCTCTTGGAT
CTCGCCGCCT ACAGGGAGTT CCTCGAGGGA CGATTACCGG CGCACGAGTA CCCCGCCGAG
GCGATACAGA AGTCCATCGC GAAGATCAAG GAGTACCTAC TCGCGCGGGG CATACAGCCC
TAG
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| Protein sequence | MSKKYFLDEE ELPREWYNIL PDLPEPLPPP LNPATGKPVS PEDLEPIFPK ELIRQEVSQE
RFIPIPEEVL EVYRIWRPTP LIRATRLEKA LRTPARIYYK YEGVSPPGSH KPNTAVAQAY
YNAREGVARL TTETGAGQWG SALSFATMLF GLKLTVYMVR VSYQQKPYRA ILMQTWGAEV
VPSPSNRTKA GRAFLEKDPE HPGSLGIAIS EALEDAIEHE DTKYSLGSVL NHVLLHQTII
GLEAIKQMQA LDEFPDIVIG CVGGGSNFAG ISYPFYYLVR SGKAPKKTRF LAVEPASCPS
MTKGEYMYDF GDTARLTPLL KMYTLGHDFV PPPIHAGGLR YHGAAPTLSL LKKAGIFESV
AYNQVEVFEA ARLFARTEGI VPAPESAHAI KAVIDEALEA KRKGEEKVIL FNLSGHGLLD
LAAYREFLEG RLPAHEYPAE AIQKSIAKIK EYLLARGIQP
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