| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0884 |
|---|
| Symbol | |
|---|
| ID | 4600827 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | + |
|---|
| Start bp | 831696 |
|---|
| End bp | 832832 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639773662 |
|---|
| Product | KH domain-containing protein |
|---|
| Protein accession | YP_920288 |
|---|
| Protein GI | 119719793 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1702] Phosphate starvation-inducible protein PhoH, predicted ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.145577 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCTTC CGTTTACACC TGCTACTGAG AAGCAGAAGA TGTTGCTGGG AGCTCTCGAA
AGCCCGGACG TGGACCTAGT GGGGGTCTTC GGTCCCAGCG GTACGGGGAA AAGCTTCGTC
GTGCTCCTCT ACGGCCTCTC TGCGGTTCGG AGCGGGAAGT ACAAGAGGAT GGTGGTCGTA
AAGCCTCTAG TAAGCCTCTC CAGGTCTAAG GTACTCGACT CCAGCGAGAT GGGTAACCTC
TTCTTCGAGA TAGCCTCCTC CTACGTGGAA GACGTGGCCG GCGACTACGT AGACCTGAAG
GAGCTTAGGG AGATGTTCGA CCAGAGAAAG GTGGTGTTCG TCGACCCGGA CTTCCTCGCA
GGTAGGACTT TCGACAACAG CCTGGTCTTC CTGGACGACG TCCAGTACGC CTCGCCCGAC
CTCGTGACGG AGTGCATCAT TAGAACCGGG AAGAACTCCA AGCTCGTAAT AGCTGGTGAC
CCCATACTCC AGGCGCTCGA AGGAAAGACG AGAAACACTG CCGCTATAGC CCGGGAGTTG
CTCCTCGGGG AGGAGAGGTC CCTCGTTATA AACATGGGTA TAAACGACAT AGTGAGGCCC
GGCTCCAAGA GAGGCTTCAA GCTGGCGCTC GAGTCAAGGT TGAGGCGCAG GGCCCTCAGC
GAAGAGGAGG AGAAGGTGAA AGCGATACTT CAAAGCCATG CCCCTGACGC CGACGTGGTG
ACCGTGGTCT GGCTAAAAGA CCTGAAGGAA AAGTTCGGCG CGCACACAGC CCCCGATGTC
CTGGCGGTCG CGAAGGAGAA TACCCTGAGC AGGCTTATAG GGAAGAAGGG CGAAAGGATA
AACAAGGCCC AGGAGGAGGC GGGGGTCCAG ATAAGGGCTG TCGAGTTGAC GCAGGATCTC
GGGGAGATAG TGAAGGCAAT ACACCCAGTG GGGTGGATCA GGAAGCATAT CACGAGCGTA
GAGATAGAGG GCTCGGAGCT CGCCGTATAC GTAAATCCCG ACGAGTACGG AGCATTCGTA
GGCAAACAAG GGTCCTACAT CAGGTTCTTG GACGCCGCTG TACGGAGGCT TCTGGGGCTC
GGGGTCAGGG GGAAGCACGC CGAGAAGACC GAGCAGCGAG GAGCAAAGAG GAAGTAA
|
|---|
| Protein sequence | MSLPFTPATE KQKMLLGALE SPDVDLVGVF GPSGTGKSFV VLLYGLSAVR SGKYKRMVVV
KPLVSLSRSK VLDSSEMGNL FFEIASSYVE DVAGDYVDLK ELREMFDQRK VVFVDPDFLA
GRTFDNSLVF LDDVQYASPD LVTECIIRTG KNSKLVIAGD PILQALEGKT RNTAAIAREL
LLGEERSLVI NMGINDIVRP GSKRGFKLAL ESRLRRRALS EEEEKVKAIL QSHAPDADVV
TVVWLKDLKE KFGAHTAPDV LAVAKENTLS RLIGKKGERI NKAQEEAGVQ IRAVELTQDL
GEIVKAIHPV GWIRKHITSV EIEGSELAVY VNPDEYGAFV GKQGSYIRFL DAAVRRLLGL
GVRGKHAEKT EQRGAKRK
|
|---|
| |