Gene Tpen_0875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0875 
Symbol 
ID4600357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp824843 
End bp825382 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content56% 
IMG OID639773653 
Productputative methylase 
Protein accessionYP_920279 
Protein GI119719784 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID[TIGR00537] HemK-related putative methylase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTATACG AGCCACGTGA GGATACTTTT CTCCTTTTGG ATTGCTTGAA GCGGGGTTTC 
CGCGGAGGCG TGCTTGTAGA GGTAGGCTGT GGCAAGGGAG TGGTCAGCGT TTACGCGTCG
AACAGAGCTG ACTACGTCGT CGGGGTGGAC ATCGCGTGGG AGGCTGTTAG GCTTTCCCGC
GAGCTTGCGC GCGCATCGAA AGAGTGCCTA GTCGACTTCG TACAGGCGGA TATGCTAAAC
CCCTTTAGGG ATTCCTCGGC TGACGTCGTC GCCTCGAACC CGCCCTACCT TCCTTGCGAT
TACCGAGAAG ACCCCCTAGT CTGCGGCGGC GAAGACGGCG TTGAGTTCTC GGCGAGGCTT
GCACGAGAAG CCTTCAGGGT TCTACGTAGG AGCGGAGAGC TATTCCTAGT TGCGTCGTCT
ATTTCGAATT TCGAGAGGCT CCTCGATGTA TTAAGGGGCC TTTACGCGAG CGTTGAGGTG
GCAGAGGAGA GAAGACTCTT CTTCGAGAAA CTCTTCTGTC TACGCGCGCT GAAACCTTGA
 
Protein sequence
MVYEPREDTF LLLDCLKRGF RGGVLVEVGC GKGVVSVYAS NRADYVVGVD IAWEAVRLSR 
ELARASKECL VDFVQADMLN PFRDSSADVV ASNPPYLPCD YREDPLVCGG EDGVEFSARL
AREAFRVLRR SGELFLVASS ISNFERLLDV LRGLYASVEV AEERRLFFEK LFCLRALKP