| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0861 |
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| Symbol | |
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| ID | 4602204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 810940 |
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| End bp | 813174 |
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| Gene Length | 2235 bp |
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| Protein Length | 744 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639773639 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_920265 |
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| Protein GI | 119719770 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCCTCGG ACGACGTACT CGAGGCTTTG AGGAACGACA GCGGCCACAG GGTAGTCTAC
GTCTTCTTCG AGAGCCCTAG GGAGCCTGAG CCCGGGCCCC CCGTGGAGGA GGTCGTAAAG
GAAGAGGTGC TCGTCAAGGC TTTGAAAAGC AGGGGTATAG CGAGGCTCTA CAGGTTTCAG
GCTGAGGCTA TCGAGTCGAT AAGGTCCGGG AACAACACGC TCATAATAGC GGGTACCGGT
ACTGGGAAGA CGGAGGCGTT CCTGGTACCA ATCCTGGAGA GGCTCTATAG GGAGCCCGAG
GAGACCGGCA TCCTGGTGTA CCCTACGAAG GCGCTCGCAA GGGACCAGGT GGAGAGGATA
TACTCGTACG CCGGGGCTGT CTTCGGCTTC AGGGTCTCCG TGTACGACGG GGATACCCCT
GAGAAGGAGC GCGAGATGCT ACAAGTGTAC CCGCCCAGGC TACTCGTAAC GAACCCGGAC
ATGCTCCACC TGAGCCTGCG CAGAGGGGAA GGCGTGAAGC CTATACTCGA GAAAGCCAAG
TTCGTCGTGT TGGACGATGC GCATATATAT AGCGGGGTTT TCGGGTCCCA CGTTCACTAC
GTCTTAAAGC GCATGAAGAG GTTCATGCCA GCGGACGCAG TCTTCGTGGC CTCCTCAGCC
ACCATAGGAA ACCCGCGCGA GTTCTCCCAA AAGCTCTTCG GAGAGGAGTG CAGGGTTGTC
GAAGCCGGTC TGACCCGGCG TGCCCCCGTG TACCACGTGA TGGTAAGGCC CGCGGCGAGG
TCACGCATGG CGGAGGCGCT GCGCCTCTTG AAGATCCTCG CTGAGCGGCG TCTGCGGACG
TTACTTTTCG TGGACAGCCA CAAGGTGGCG GAGAGCCTCA GCGTCCTAGC GCAACGCGAG
GGGCTTAAAG TCTCCGTGCA CAGGGCGGGG CTTCTCCCGA GCCACAGAAG GAGCGTCGAG
GAGAAGCTCA GGAAGGGGGA GCTCGACGCC GTCGTGACGA CCCCTACGCT GGAGCTAGGG
ATAGACATAG GCGAGCTCGA CGCCGTCGTG CTGTACGGCG TGCCTCCCAC GTTCAGCAAG
TACGTGCAGA GAGCCGGCAG GGTGGGGCGG CGGGGCAGGA CGGGGTACGT CGTCATGATC
CTCGGGGACG ACCCGATAAG CTCGTACTAT GAGAGAAACC CCGCGGAGTT TTTCAACCAA
AAGCCGGACC CGGTGTTCCT CGATCCCCTA AACGAGGAAG TTATGCGCGT ACACCTGGTG
GCTATGGCTC AGGATGCGCC GTTCAGGCTG GACAGCCTAG GCGGGGCTGA GCGCAGAGTA
TGCGAGAAGC TACTAGAAGA GGGGTTGCTG AGGCTAGCCC CGGGAGGGTT CGTCGAGCCG
ACAAGCAGGG GGTTAAGGTT CCTGGCGTCC CGCGACAACA TCAGGGGTAT AGGGGAGCAG
GTGAAGATAG TAACGGATAC AGGCAAGGTC ATCGGGTTCC GGGAGATGCC CCAGGCGATA
AAGGAGCTCT ACCCGGGAGC TATCTATATC CATGGGGGAA CTCCCTACAT CTCCCTGGGC
ATAGAAGGTA GGAAGGCGAG GGTCAAGCTT CTACCGACGT CCACGATACC CGTGACGACC
TCGCCGCTAT ACTACACCTG GCCGTTCGAG AATGAGGTCC TCGACGAGAG GAGCGTTTTC
GGGATACGCG TCTCCTACCT GGAGCTCGAG GTTGCGGATC ACGTCTACGG CTACGTCACG
AAGAGCTTCC CAGAGGGCCA CGTCATTTCG CAGAAGATAC TCGAGGAGGA GCTCACCTAC
AGGTTCAAGA CGAAGGGGTT GCTCCTGGAG ATGCAGCCTA ACCCCCAGTG GAGCGAGCTT
CAAAACGCGG AAGCCTTCCA CGCAGTAGAA CACGCCCTGA TCTACGCGGG GCAGCTCGTC
GTAGGCGCTG CGCCGACAGA CATGGGTGGC ATCAGCTTCC CCTCCGGCCA CATATACATC
TACGACGCCT TCCCGGGAGG GTCGGGCGTA ACGAAGCAAC TCTTGGAGAG GCTCAAAGAA
GCTCTGCACA AGGCGTTCGA CATAGTCTCG AGGTGCACCT GCGAGGATGG ATGCCCCAAG
TGCATTTTCT CTCCTTACTG CGGCAACAAC AACAGGATAC TCTCGAGGCG GAAAGCCTCC
CAGGTTCTCG GCGAGGTACT ATCGCTGAGG ATCGCGGGCA GAAGCCCCGA GAGGTACGGC
AAGCCTCTCG TGTAG
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| Protein sequence | MSSDDVLEAL RNDSGHRVVY VFFESPREPE PGPPVEEVVK EEVLVKALKS RGIARLYRFQ
AEAIESIRSG NNTLIIAGTG TGKTEAFLVP ILERLYREPE ETGILVYPTK ALARDQVERI
YSYAGAVFGF RVSVYDGDTP EKEREMLQVY PPRLLVTNPD MLHLSLRRGE GVKPILEKAK
FVVLDDAHIY SGVFGSHVHY VLKRMKRFMP ADAVFVASSA TIGNPREFSQ KLFGEECRVV
EAGLTRRAPV YHVMVRPAAR SRMAEALRLL KILAERRLRT LLFVDSHKVA ESLSVLAQRE
GLKVSVHRAG LLPSHRRSVE EKLRKGELDA VVTTPTLELG IDIGELDAVV LYGVPPTFSK
YVQRAGRVGR RGRTGYVVMI LGDDPISSYY ERNPAEFFNQ KPDPVFLDPL NEEVMRVHLV
AMAQDAPFRL DSLGGAERRV CEKLLEEGLL RLAPGGFVEP TSRGLRFLAS RDNIRGIGEQ
VKIVTDTGKV IGFREMPQAI KELYPGAIYI HGGTPYISLG IEGRKARVKL LPTSTIPVTT
SPLYYTWPFE NEVLDERSVF GIRVSYLELE VADHVYGYVT KSFPEGHVIS QKILEEELTY
RFKTKGLLLE MQPNPQWSEL QNAEAFHAVE HALIYAGQLV VGAAPTDMGG ISFPSGHIYI
YDAFPGGSGV TKQLLERLKE ALHKAFDIVS RCTCEDGCPK CIFSPYCGNN NRILSRRKAS
QVLGEVLSLR IAGRSPERYG KPLV
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