Gene Tpen_0846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0846 
Symbol 
ID4600780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand+ 
Start bp795243 
End bp795974 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content49% 
IMG OID639773623 
Productmembrane protein-like 
Protein accessionYP_920250 
Protein GI119719755 
COG category[S] Function unknown 
COG ID[COG4920] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAGAG CGCTAATACT ACAGTATCTC CTCGGCCTCG TCTTGATGGT ACTCTTCGCT 
TACATGAACG CGAACTACCC GGATAAGACG TGGCTTTTCT TTATTCTCTA CTTCACGGCT 
TTCATGGTTA TAATGATGGT TGTAACTGGG CGTCACGCGA GGAGCGTCTT GAGGGACCTT 
GAAGAGGTGA AAAGCGGGGA AATCCTCTAC TCTTCAAAGC CCGACGAAGT GCTTAAACTC 
AGGGAAAAAG ACTTCCAGCT CACCCAGCCG GAGCTCATGG CACAGTTCAA GGCAAGCATG 
ATCCCACTTT TATCGCTAGT AGTATTTATC CTCGTATTCT ACATACCTGG CTTCAGGGAG 
TTCTTTACAG GTCTAGGTAA GAGCATGGCT TTAGACGAGA AGACGGCGAA CTTTCTAAGC 
TTCCTCGCGC TCTACGGGTT CTTCTACGCA TTCTCCTTGG CTACGGGGCT CTACGCGCGC 
AGGCTTCAGT CAAAGACGGG CTCTCTCATT ATTGCTACAT CTTACACTGT AACCTCCAAG 
GGGATCATAG TGGACGAAAG AACCCCGGTG AAGTTCCCCT GGAAAGGCGA CATCATCGTT 
GACTCGAGAA GGAAGTTCGT ACAGCTAAAC ATAACCCAAC AAATAATGGG AACATCAATC 
ACGCAGAAGA TCAGGCTCTA CAACCCGGAG CCAAGCAAGC TCGCCAACAT ACTAAAGAGC 
TACAAAGCAT AG
 
Protein sequence
MSRALILQYL LGLVLMVLFA YMNANYPDKT WLFFILYFTA FMVIMMVVTG RHARSVLRDL 
EEVKSGEILY SSKPDEVLKL REKDFQLTQP ELMAQFKASM IPLLSLVVFI LVFYIPGFRE 
FFTGLGKSMA LDEKTANFLS FLALYGFFYA FSLATGLYAR RLQSKTGSLI IATSYTVTSK 
GIIVDERTPV KFPWKGDIIV DSRRKFVQLN ITQQIMGTSI TQKIRLYNPE PSKLANILKS 
YKA