| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0817 |
|---|
| Symbol | |
|---|
| ID | 4601988 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | + |
|---|
| Start bp | 770405 |
|---|
| End bp | 771853 |
|---|
| Gene Length | 1449 bp |
|---|
| Protein Length | 482 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639773594 |
|---|
| Product | prolyl-tRNA synthetase |
|---|
| Protein accession | YP_920221 |
|---|
| Protein GI | 119719726 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0442] Prolyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00408] prolyl-tRNA synthetase, family I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGC AGGGGATCAC TGTCAGCAAG TCCGAGGACT TCTCGGAGTG GTACTCGCAG
GTACTGAGTA AGGCGGGGCT TGTCGATCTA CGCTACAACG TCCAAGGCTT CGTTGTCCAC
AAGCCCTGGC TTATGCGCAT CATAAAGGCT ATTTACCGCT TCTTCGAGGA GGAGCTGGAG
AAGACCGGGC ACGAGCCTGT CCTCTTCCCC CTCGTGATAC CGGAGGAGAA CTTCGAGAAG
GAGAAGGAGC ACGTCGAGGG TTTCAAGCCG GAGGTGTTCT GGGTTACCCA AGCGGGCGAC
GAGAAGCTTG AACGGAGGCT GGCGCTTAGG CCGACAAGCG AGACCGCTTT CTACTACATG
TACTCCTACT GGATACAGAG CTGGCGCGAC CTACCCCTCA AACTCTATCA GAGCGTTAGC
GTGTACCGCA ACGAGAAGAA TACGAGGCCG TTGATACGGG GGAGGGAGTT CCTCTGGATA
GAGGCCCACG ACGCGTTCGC AACGCACGAG GAGGCGCTTA ACCAGATACG CGAGGACATG
GAGAACTCGA GGAAGGTTAT CTGGGAGAAG CTCGGGATCC CGTTTTTGTT CCTGAGGAGG
CCTCCCTGGG ACAAGTTCAG CGGTGCTGAA GACACGTACG CCGCCGACAC TATAATGCCG
GATGGAAGGG TGCTTCAGAT ATCCTCGACG CATGACCTCG GCCAGAGGTT CGCGAAGGCT
TTCAACGTTA CCTTCCTGGA CAAGGACGGC AAGAGGAAGT ACGTTTGGCA GACGTGCTAC
GGCCCCGGCA TCTGGAGGAT AACCGCCGCA CTCATAGCGA TACACGGCGA CGACAAGGGG
CTCGTACTCC CGATGAACGT GGCCCCGATA CAGGTCGTCA TCGTCCCCAT ATACTACAAG
GAGTCCGACA AGGAGAGGGT ACTCGAGAAA TGCAGGAAGC TGGAGGCGAT GATAAGGGAG
GCTGGCTACA GGGTCTACCT GGACGCCAGG GAGGAGTACA CGCCGGGCTG GAAGTTCAAC
GACTGGGAGT TGAAGGGGGT TCCCGTGCGC CTAGAGGTGG GGGTACGGGA GGTCGAAACA
GGGACGGTCA CGGTGTTTAG GAGGGATTTG AGGGTGAAGG AGAAGGTCGC GGACAGCGAG
CTGATAAGCC ACATCCGCAA GCTCGAGAAC GACATTCTCG AGGAGCTGAA GAGGAGGGCG
AAGGAGTTCT TCGAAAGCAG GATAGTCACG GCGACGCGCA GAGAGGAAGT CGAGGAGGCG
TTACGCTCGG GAAAGATGGT CAAAATGCCT TTCTGTGGAC GGGAGGAGTG CGCAGACGAC
TTGAAGGAAG CTACCGACGG CGGGAAGGTC AGGGGTACCG AGATAGACTT CAAGGAGGGA
GACTACGGGC GTTGCGCCTG GTGCGGAGCC CCCGCGCGCC TAATAGTATA CGTCGCTAAG
TCGTACTAG
|
|---|
| Protein sequence | MSEQGITVSK SEDFSEWYSQ VLSKAGLVDL RYNVQGFVVH KPWLMRIIKA IYRFFEEELE
KTGHEPVLFP LVIPEENFEK EKEHVEGFKP EVFWVTQAGD EKLERRLALR PTSETAFYYM
YSYWIQSWRD LPLKLYQSVS VYRNEKNTRP LIRGREFLWI EAHDAFATHE EALNQIREDM
ENSRKVIWEK LGIPFLFLRR PPWDKFSGAE DTYAADTIMP DGRVLQISST HDLGQRFAKA
FNVTFLDKDG KRKYVWQTCY GPGIWRITAA LIAIHGDDKG LVLPMNVAPI QVVIVPIYYK
ESDKERVLEK CRKLEAMIRE AGYRVYLDAR EEYTPGWKFN DWELKGVPVR LEVGVREVET
GTVTVFRRDL RVKEKVADSE LISHIRKLEN DILEELKRRA KEFFESRIVT ATRREEVEEA
LRSGKMVKMP FCGREECADD LKEATDGGKV RGTEIDFKEG DYGRCAWCGA PARLIVYVAK
SY
|
|---|
| |