| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0805 |
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| Symbol | |
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| ID | 4602136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 758576 |
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| End bp | 759463 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639773581 |
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| Product | type II secretion system protein |
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| Protein accession | YP_920209 |
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| Protein GI | 119719714 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCGTACA TCGAGATGAC CCCTCAGCGA AGGCTTATGT TGTTGGCCGT GGGGGCTATG
CTCGGCGCGG TGCCACTGTT TCTCGTAGCT TCTCTTTTCA GGGGGGAGTT GCTGTCCAGC
ATCCAAAACG CGGGGGGAGT CTACCTGGTC ACTTCGCTCA GGGTTAACGT ACTCGTAACG
TTTTCGCTTG TTCTCTTCAC GTTGCCGTAC GCCTTCGTTG ACTACTTGAA CAGGTCGTTT
ACGCGCTCTG TTGAGAGCGT TTTACCGGAA CTCTTCAAGG GGTTGGCTGA GGCCGTGAGG
TCTGGGCTAA CGCTACCGGA GGCCTTGTCG AGCGTGGCGG AAACCCTCGG GGGAGAAGTA
GGGAAGATGC TGAGGCAGGT CGTTCTCCTG ACGGAGATGG GGGTAACGTT CCAGGAAGCC
ATAGCCAGGG CTTTCTCGAG GTACCGCTTA CCGAGCCTAG ACCGCCTGGG ATCCATACTT
TTAACGGCGT ACGAGAGCGG TGGGAAGGTA ATAGACGCCC TGGAAACCTC GGCGCAGATA
TTCGGCGCCA TCAGGAGCTA CGAGGAGGAA CGCGCCACGA CGATAAACCC CCACGTCTTA
ACGATCTATG CGGCTACGAT ACTCTACGTA ATCCTCTCCT TAACAATCCT CTACGTCTTC
GTAATGCCGC TCAGCAGGCT ACAGGGGATA CCCGGGGCGC TGGGTAAGAT AAACCCCGGC
GTCTACGCAG CGGTGATGTA CTACTCAGGA GTGATGATAG CGTTCTTCGG CGGGCTAATA
GCGGGGAAGA TGCGGCACGG CAAGGCCTCC GCCGGGCTCA TACACGCAGA CATACAGGTT
GCCATCGTGG CCTTCTCGTT CCTCTTGGCG GAGAAGGCGA TGGCGTAG
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| Protein sequence | MPYIEMTPQR RLMLLAVGAM LGAVPLFLVA SLFRGELLSS IQNAGGVYLV TSLRVNVLVT
FSLVLFTLPY AFVDYLNRSF TRSVESVLPE LFKGLAEAVR SGLTLPEALS SVAETLGGEV
GKMLRQVVLL TEMGVTFQEA IARAFSRYRL PSLDRLGSIL LTAYESGGKV IDALETSAQI
FGAIRSYEEE RATTINPHVL TIYAATILYV ILSLTILYVF VMPLSRLQGI PGALGKINPG
VYAAVMYYSG VMIAFFGGLI AGKMRHGKAS AGLIHADIQV AIVAFSFLLA EKAMA
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