Gene Tpen_0748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0748 
Symbol 
ID4600399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand+ 
Start bp699520 
End bp700161 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content65% 
IMG OID639773524 
ProductAMMECR1 domain-containing protein 
Protein accessionYP_920153 
Protein GI119719658 
COG category[S] Function unknown 
COG ID[COG2078] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00296] uncharacterized protein, PH0010 family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAGGT TGTCTGCTGA GGAGGGAGCT CTCCTCGTTC GGCTCGCTAG GAGGGCTGTC 
GAGGAGTACC TGGAGAACGC CAGGGTGATA GAGCCTCCCA GGGACACCCC GCCGTCCCTG 
CGCGAGAAGA GCGGCGTGTT CGTGACGATA GAGAAGATAC TCGTAGACCC CCTCGCGCGC 
AGGGCGAGGA GGGAGCTGAG GGGGTGCATA GGCTACCCGG AGCCAGTGCT ACCCCTAGCG 
GAGGCGACGA TCCACGCGGC TATAGCGGCC GCGACCGAGG ACCCGCGCTT CCCGCCCATG 
ACCCCCAGGG AGCTCGACAC CGTGGTATTC GAGGTAAGCG TTTTAACCAA GCCGGAGCCC 
GTCGACTACA GGTCTCCCGA GGAGCTGCCC GACAAGATAA AGGTCGGCAG GGACGGCTTG 
ATAGTGGAGT ACGGGGCTGC CCGCGGCCTC CTGCTACCGC AGGTCGCGGT GGACGAGGGG 
TGGGACCCGG AGGAGTTCCT GAGCTACGCC TGCCTGAAGG CGGGGCTGAG GGACGACGCG 
TGGAGGCATG GCGGCTTGAA GGTCTACCGC TTCCAGGCCC AGATATTCGT GGAGACAACG 
CCTAAGGGGG ACGTCGTGGA GCGCTTCCTC GAGGTAGTCT AG
 
Protein sequence
MGRLSAEEGA LLVRLARRAV EEYLENARVI EPPRDTPPSL REKSGVFVTI EKILVDPLAR 
RARRELRGCI GYPEPVLPLA EATIHAAIAA ATEDPRFPPM TPRELDTVVF EVSVLTKPEP 
VDYRSPEELP DKIKVGRDGL IVEYGAARGL LLPQVAVDEG WDPEEFLSYA CLKAGLRDDA 
WRHGGLKVYR FQAQIFVETT PKGDVVERFL EVV