| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0696 |
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| Symbol | |
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| ID | 4602011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 646891 |
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| End bp | 647841 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639773470 |
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| Product | ribonuclease Z |
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| Protein accession | YP_920101 |
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| Protein GI | 119719606 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
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| TIGRFAM ID | [TIGR02651] ribonuclease Z |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.275565 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATCT CGAGCATTCG CATTATGTTC TGGGGAACCG GAGGAGCGGT GACCCCGAAG
AGTGCCGAGC AACCATGCAT AGCGGTGAAG ATGGCCGACA CAGTCTTCCT GTTAGACGTG
GGAGAGCGTT GCCAGAAGGC CTTGGAGTGC TTCCACCTAG GAGTAAACTC GCCCCTTTAC
ATTTTCGTGA CTCACCTTCA CAGCGACCAC TACAGTGGGT TAATCCCTCT CCTAGAGACG
CTGTCCTTGC TCGGAAGAGA GAGGGCTCTT AGCGTTTACG GACCCCCGGG TCTTGGCTCG
GTGGTTACCG GTAGGAGGAC TACAGGCTAC CCGGTAAGCC TGACGGAGCT CTACGGGTGG
GAAGGAATCC TTCGTTTTCC GGGCCTGCCG CTTACAGTAA GCTACGTGGC GGCGCCGCAC
AGCTACGGGG CTTTGTCCTA CATTATCAGG GTTGAAGATA AAGTGAAGCT AGACGAGGAG
AAGCTGGAAC AAGAGAAGAT TCCTCCTGCG CTACGCAAGG AGCTTCTCGA AAAGGGAAAA
GTGAGGGTAG GCTCTAAGGA GTACAGTCTC AACAGCTTCG TTAAGCAAGT GGTCCGCGGC
GTAAAGATCT CGTACACGGG AGACTCGCTT CCTAGCCACA GGTTCGCGTC TAAAGCTATG
GAGTCGGATG TCCTTATACA TGATTCAACG CTCCTTAAGA GAGACTGGTA CAGGAAGCCT
TACATGGCGC ACTCGACTGT CGAGGACGCG GTTGCGGTGT TTAAGGCGAC GCGGTCGAGG
CTTCTCGTCT TGACGCATTT CAGCGCGATG TACAGAAACC CGGCAGTCGA CCTTTCAGAG
GCTGTGGGCG AATACCCGAG GGTACTAATA GCCGAGAAGG GGCTAACTAT AGACGTAGCA
TTCACCGAGC CACGCGTTTT CAGCGTGCGC ATTAATACCG ATTGCATCTA A
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| Protein sequence | MNISSIRIMF WGTGGAVTPK SAEQPCIAVK MADTVFLLDV GERCQKALEC FHLGVNSPLY
IFVTHLHSDH YSGLIPLLET LSLLGRERAL SVYGPPGLGS VVTGRRTTGY PVSLTELYGW
EGILRFPGLP LTVSYVAAPH SYGALSYIIR VEDKVKLDEE KLEQEKIPPA LRKELLEKGK
VRVGSKEYSL NSFVKQVVRG VKISYTGDSL PSHRFASKAM ESDVLIHDST LLKRDWYRKP
YMAHSTVEDA VAVFKATRSR LLVLTHFSAM YRNPAVDLSE AVGEYPRVLI AEKGLTIDVA
FTEPRVFSVR INTDCI
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