| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0685 |
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| Symbol | |
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| ID | 4601885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 633452 |
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| End bp | 634786 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639773458 |
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| Product | pseudouridylate synthase |
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| Protein accession | YP_920090 |
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| Protein GI | 119719595 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0585] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00094] tRNA pseudouridine synthase, TruD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCGCGTC GCGCGGATAG CCAGCTCGAC AGGCTGCTAG GCCTGGAGTA CTACGGTTTA
GACGGTGCTG GTACAGGTGG GAAGCTTAGA AGCTCGCTCG ACGACTTCAT CGTAAGGGAG
ATATCTATCG ACGGGGAAGT AGCTTCTCCA GAGTGTAAGT ACGCGGAGGG AGCCGGCGAG
TTCACCTGGT TGGTGCTCGA GAAGAGGAAA ATAGACACTG TGAGTGCAGC GAGAGCTGTT
GCCAGGTTTT TTGGGCTAAA GTTGCGGGAT GTAGGTATCG CGGGTCTCAA GGATACGTCG
GCAGTTACGT ACCAGTTCAT CTCCATACCC GGAGAGGTCA AAATGGAATC AATAGAGGAG
TTCAACCTGT CGCACAAGCG CGTTAAGCTA CACTGCCCCT TCAGGAGGCC CTTCGCGTTG
AAGCCCGGCA TGCTCTACGG CAACTTCTTT AACGTGAAAG TGCGGGGTGC AGAGTGCCTG
GAGTGTTTAG AGGCCTTGCT GCGCGAGTTG AAGGAGAAGA AGGCTGTACC CAACTACTAC
GGCTACCAAA GATTCGGCAC CGTAAGGCCG GTCACGCACG TAGTCGGCAG GATGATACTC
TTAGGAGAGT TTAAGGAGGC GGTCGAAGAG CTGATATACA AGGTCTTCCC GGGGGAGTCT
CAAGTGTCAA GGAGGGCCCG CCTTTTCCTC TCAGAGAGCG GCGACCCCCT CAAGGCGTTG
GAGCTCTTCC CCAAGTCTCT GAAGAGCGAG AGAGCTGTTC TGAGGCACTT GGCCAGGCAT
CCGGGCGACT ACGTGGGGGC TTTGCGCGCG GTTTCGCCCT ACGTGAAGAA ACTCTTCATC
GGGGCTTACC AGGCCTACCT TTTCAACAAG TTGCTCAGCA AGAGGATAGA GAGGGGTCTT
TCCTACTACT ACCCCGTTCC CGGCGACACG GTTGGGATAT TCAGAGAAAA GAGAGGAGGC
GAAGTCACAG GGGTGTTGAA GGTAAACGAC GCCAACGTGG AGAAGGTGAA ACGGTGGATA
GACGAGGGCT TTGCAGTACT CCTACTCCCC GTGTTCGGGT ACAACAGCAA CCTTTCGCAC
GGAGTCGTCG GCGAGATAGA GCGCGAGTTA CTGAGAGAAG AGGGAATCGA CGTCTCTATG
TTCAGGGTGA AGCAAATCCC CGAAGCATCA TCCGCGGGGA CCTATAGGTA CGCCTCCCTA
GTGCCCCATG CTCTGAATGT CCGGGTCTTC GGAAACGACT ACGAGCTTAC ATTCGTACTA
AACAAGGGAG CCTATGCTAC CACCCTTCTA CGAGAGCTGG TAAAACCCGT AGAGCCGGCG
AGACAAGGCT TCTGA
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| Protein sequence | MARRADSQLD RLLGLEYYGL DGAGTGGKLR SSLDDFIVRE ISIDGEVASP ECKYAEGAGE
FTWLVLEKRK IDTVSAARAV ARFFGLKLRD VGIAGLKDTS AVTYQFISIP GEVKMESIEE
FNLSHKRVKL HCPFRRPFAL KPGMLYGNFF NVKVRGAECL ECLEALLREL KEKKAVPNYY
GYQRFGTVRP VTHVVGRMIL LGEFKEAVEE LIYKVFPGES QVSRRARLFL SESGDPLKAL
ELFPKSLKSE RAVLRHLARH PGDYVGALRA VSPYVKKLFI GAYQAYLFNK LLSKRIERGL
SYYYPVPGDT VGIFREKRGG EVTGVLKVND ANVEKVKRWI DEGFAVLLLP VFGYNSNLSH
GVVGEIEREL LREEGIDVSM FRVKQIPEAS SAGTYRYASL VPHALNVRVF GNDYELTFVL
NKGAYATTLL RELVKPVEPA RQGF
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