Gene Tpen_0683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0683 
Symbol 
ID4601883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp632487 
End bp632978 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content53% 
IMG OID639773456 
Producthypothetical protein 
Protein accessionYP_920088 
Protein GI119719593 
COG category[S] Function unknown 
COG ID[COG1839] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.510423 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCTGA AATTCGAGGT TGTAGATGTG AAGCTCCCGT CCAAGTCGAA CGTGATTATC 
GGCCAAACGC ACTTCATTAA GAGCGTGGAG GACATAGCTG AGGCTGTATC TACGAGCGTG
CCCGGAGTAA AGTTTGGGCT GGCCTTCAAC GAAGCTTCGG GTGACAGGCT GGTACGCTAC
GACGGGAATG ACCCCGAGCT CATCGAGGCA GCTATAGATG CGGCGAAGCG TATAGGCGCC
GGGCATGTTT TCGTTTTGTT TATCCGGGAC GCTTGGCCGA TAAACGTCTT GAACCAGCTC
AAAAACGTCC AGGAAGTAGC CAGTATCTTT TGTGCAACAG CTAATCCCGT TCAAGTAATC
GTGGCGGAGA CCCAGCAAGG GAGGGGGGTT ATGGGAGTAA TCGACGGCTT CACAGTTGTC
GGCGTCGAGT CCGAGGAAGA CAAGAAGAAG AGAGTAGAGT TCTTGAGGAA GATAGGCTAC
AAGAGGGCCT AG
 
Protein sequence
MELKFEVVDV KLPSKSNVII GQTHFIKSVE DIAEAVSTSV PGVKFGLAFN EASGDRLVRY 
DGNDPELIEA AIDAAKRIGA GHVFVLFIRD AWPINVLNQL KNVQEVASIF CATANPVQVI
VAETQQGRGV MGVIDGFTVV GVESEEDKKK RVEFLRKIGY KRA