Gene Tpen_0682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0682 
Symbol 
ID4601882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand+ 
Start bp631771 
End bp632469 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content55% 
IMG OID639773455 
Productdeoxyribonuclease V 
Protein accessionYP_920087 
Protein GI119719592 
COG category[L] Replication, recombination and repair 
COG ID[COG1515] Deoxyinosine 3'endonuclease (endonuclease V) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.718465 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGGTCC ATAGACTACC CGAGAACTTC TCCTTGGAGA GGGCTAGGCG TGCGCAGCTA 
GCTATAGCTA GGATGGTCTT AGAGGAGGAC TCTCTCCCGG AGAGCGTTCG CAGAGCCGCG 
GGCGTGGATG TAGCCTTTAA GGGAGACTAC GCATTTGCGG CGGCCGTAGT CGTCGAGTAT 
CCCTCTTTCT CTGTCGTCGA CTACTCTGTT ACACGTACAG AGGTCAGGTT CCCCTACGTG 
CCTACGCTGC TAGCTTTCAG GGAGGTTTGG CCGGCGTACA CGGCGCTGAA AAGGTTAAAG 
TCCGAGCCCG ACGTGTTGCT TGTCGACGGA AACGGGAGGC TCCACCCATT CAAGGCGGGC 
TTCGCGTGTC ACCTCGGAGT GCTCGTGGAC AAGCCAACGA TCGGCGTAGC GAAGAAGCTT 
CTAGTCGGAG AAGTGGGGAG CTGGAAGAGC GGCGTAGCGC CCGTGCTCTA TCGCGGAGAG 
GTTCTCGGAA TGGCTGTCAA AACCTCCGAG CGTTCAAAGC CGGTCTTTGT CAGCATAGGT 
CACAAAATCA GCCTAAACAC AGCAGTGTGG ATAGTTAGAA TGTTTACAAA GAGAGGGTTA 
AGGTTGCCTG AACCTCTGAG ACTCGCACAC CTCTACGCTA CAGCATACGC ACGCGGAAAC 
ATGGAAGAAA AAGATTTCTA TCTAGACGAG CCCAGTTAA
 
Protein sequence
MRVHRLPENF SLERARRAQL AIARMVLEED SLPESVRRAA GVDVAFKGDY AFAAAVVVEY 
PSFSVVDYSV TRTEVRFPYV PTLLAFREVW PAYTALKRLK SEPDVLLVDG NGRLHPFKAG 
FACHLGVLVD KPTIGVAKKL LVGEVGSWKS GVAPVLYRGE VLGMAVKTSE RSKPVFVSIG 
HKISLNTAVW IVRMFTKRGL RLPEPLRLAH LYATAYARGN MEEKDFYLDE PS