| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0648 |
|---|
| Symbol | rps10p |
|---|
| ID | 4601514 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | + |
|---|
| Start bp | 599708 |
|---|
| End bp | 600037 |
|---|
| Gene Length | 330 bp |
|---|
| Protein Length | 109 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639773420 |
|---|
| Product | 30S ribosomal protein S10P |
|---|
| Protein accession | YP_920053 |
|---|
| Protein GI | 119719558 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0051] Ribosomal protein S10 |
|---|
| TIGRFAM ID | [TIGR01046] ribosomal protein S10(archaeal)/S20(eukaryotic) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.000577267 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGTTCTA GGTGGGTCGC CGTGCCAAGC AAGGTACGCA TACGTCTGAG CAGCACGAAC
ATCGAGGATC TAAACGCTGT TTGCGAAGAG ATTCGGCAAA TAGCCCAGAA GACAGGCGTG
AAGATGAGGG GGCCCATACC GTTACCCGTT AAGAGAATGA GGGTTGTCAC TAGGAGAGCT
CCATCGGGGC AGGGTTACGA GACATTCGAT AGGTTCGAGT TGAGGATTCA TAAAAGGTTA
ATAGACTTGG ACGCAGATGA GAGAGCGACT AGGCTTCTTC TACGAACACG TGTACCTCCC
ACTGTGCGCG TCGAAATCGA GGTTATCTGA
|
|---|
| Protein sequence | MRSRWVAVPS KVRIRLSSTN IEDLNAVCEE IRQIAQKTGV KMRGPIPLPV KRMRVVTRRA
PSGQGYETFD RFELRIHKRL IDLDADERAT RLLLRTRVPP TVRVEIEVI
|
|---|
| |