Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_0646 |
Symbol | |
ID | 4601512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | + |
Start bp | 595998 |
End bp | 598124 |
Gene Length | 2127 bp |
Protein Length | 708 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639773418 |
Product | hypothetical protein |
Protein accession | YP_920051 |
Protein GI | 119719556 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000518672 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCAATG ACCCCAGACA GCCCGGCCGC GGGAGGACGG GGGAGGAGGG GGCCGAGGCG CAAGCAAAGA CTAGGCCTGG GGGAGAAACC CTGCAATCCC CTGCCGCTAA AATTGAATTT TTTTCCCGCG TGTCTAACCC AACCCTCCCA TCATTGGGGG CCCTCCCCGA CAGGGAGGGG TTCAATGAGC CCCGCGCGCG GGGAGGCCCG GCGCGGGGCG AGGGAGGCGT AGCCCGCGGG GAGCCCCGGG GTTACGCCTC TCCGGGGCCC AGTGAGCGCC CCGGGGTGGG GAGGCCCTCC CGGGCGCGAG GGGAGCGCTT GGCCGCGGGG AGGCCCGGGC CAGGCGCTCT AGACACGCGG GGGCGGCGGG GGAGGCGGGG CTCTGGGGCC CCAGCCCCGG GCTGGGGCGT CTCTCCCCGG TTGGGGAGAG ACCGGCCTAG GGGCCGATTC GTGAAGCCCG ACACGATGAG CCGAAAGGTG ACGGTCGCCC CTAGTAAACG ACGCCGGCCT TCCCGGGGGG CCGGGCAAAG GCGGGCGAGG CCTTGGCCCC AGCGGGCCCG CCCGAGAAAG CAATCACTTC GAAGCACTCA CCGCTCACGC CTCCCTCCCG CCACGCTGAC CCCTGATAGC GCGCCCTCGC GGGGCGCCCC ACCCGCCACG TGGAGGGTGG GTGATATGAG TGAGGCCTTG ATGAGGGGAA ATGGAGCCGT GGGGGAGGGG GTCGAGAAGA CTGTTAGGGA GGAGGTTTGG AGGCGTGCGG CTCTAAGCTT GTATGCCACC AGGACAGAGG ATAAGAGGAG GTCCAGGGGT AAGAAGAAGA AGGGCGAGAT ACACTACCGC GGCCTGCACG ATGCTGTGAC CGAGGTCGAC TGGGACTTTA CCAGGTTCGC GGCACACGCG CTGACCGTCG TGCCGGACGA CGTCTACCCG AGGTTTTACA GGTTCATCGA CATCGACGCG AGGAAGTACC TCTTGCTGAA CAGCGACGAG AGGCCACGCG AAGGAAGCGC TGTGACGGAG CTCAAAGGAA GGTTGCAAGC AATAGTCGAC GCCGGCGCCG ACGGTCTTAG AGCTGAGAAG CATGGCAGAG TCTGGCACGT ATACATACCT AGAGAGAACT GGTATGTCGT CGTGAGCAAG CCCACTAACG GCTGGTCCGT GCACGTACCG CTGAAGGGTT ACTGGGTTGA ATCAGAGTTC CCGGAGGTTC TCGTGAGGAC ACCACCAGAC GTGCTTAGAA GCCTGCAGAA AGGGTGGGTC TTAACGGATG TGACACCCCC TCGTGGACGC TTCAGCGACG TGAGTTTCGC CACGACGCAA CCGTGGCAAC TCCCCAGTAC GCTCGCAAGC TTTCCGAGCG ACGATATCAA GCTCGGCGTC ACGGCGGGCA TACTCGGCAG TACCAGGCTG AGCATCCAGT GGCACGCGCG TGTCTACGGC TACGAGGAGG CGCTCTCCTG GGCTTCAAGG CTTATCGGCG AAGTTAAACG TGCAGAGTTC CGCAGGTTGG TCGAGGAGTG CAAAGCGCTC AACGGCGACC CAGTGGCTCT TTTCACTGGC TTCTTGGGGG ACGGCGGGCT CGAATACTTT CTAAGGCTTA GATGGCTCTA CTTCAAGGTT GGACACGAGC TTCTCTACTT GCCGGCGGAG AGCGCCATTG TCAATGCTCG CTTGGCCGTG GAGAGGGCAA GCGAGTACGT GCGCTTTGTC TCGCTGGTAA CTAAGTGTCC GAAGGTCAAA CACTTCCTAT ACGTCGGCTA CGGGATGCTG CAGAAGAGGG GCAGGAAAAA CGGACAGAGA AATAACACGT TCTATGCCGA GGTAGCGGGA GCTAGGCTAC ACCTAGTCTA CATCTCTACG AAGAACCACG TCTACGCCCG TATCGCGGTC GAAGCTGTGC CTCAAGGCTG GGTGGAGGAG GCGCGCGCTC AAGGCTGGGA CGTCCGGGTG GTTAACATGG GAGGCAGGGA GTACTACCAG GTGACTCACA GTTCTCTCTT TGAACACGCG CGTAGCGACA CAGAGCTACG CGCAACACTC CTCGCCTTCG CGAAGCACAA GGCTGAGCAG TACCCCAAGG CGCAGAGCCT CGTAGAACGC CTCGAAAAAC TGGGGACAGA AGACTAA
|
Protein sequence | MSNDPRQPGR GRTGEEGAEA QAKTRPGGET LQSPAAKIEF FSRVSNPTLP SLGALPDREG FNEPRARGGP ARGEGGVARG EPRGYASPGP SERPGVGRPS RARGERLAAG RPGPGALDTR GRRGRRGSGA PAPGWGVSPR LGRDRPRGRF VKPDTMSRKV TVAPSKRRRP SRGAGQRRAR PWPQRARPRK QSLRSTHRSR LPPATLTPDS APSRGAPPAT WRVGDMSEAL MRGNGAVGEG VEKTVREEVW RRAALSLYAT RTEDKRRSRG KKKKGEIHYR GLHDAVTEVD WDFTRFAAHA LTVVPDDVYP RFYRFIDIDA RKYLLLNSDE RPREGSAVTE LKGRLQAIVD AGADGLRAEK HGRVWHVYIP RENWYVVVSK PTNGWSVHVP LKGYWVESEF PEVLVRTPPD VLRSLQKGWV LTDVTPPRGR FSDVSFATTQ PWQLPSTLAS FPSDDIKLGV TAGILGSTRL SIQWHARVYG YEEALSWASR LIGEVKRAEF RRLVEECKAL NGDPVALFTG FLGDGGLEYF LRLRWLYFKV GHELLYLPAE SAIVNARLAV ERASEYVRFV SLVTKCPKVK HFLYVGYGML QKRGRKNGQR NNTFYAEVAG ARLHLVYIST KNHVYARIAV EAVPQGWVEE ARAQGWDVRV VNMGGREYYQ VTHSSLFEHA RSDTELRATL LAFAKHKAEQ YPKAQSLVER LEKLGTED
|
| |