Gene Tpen_0646 details

Gene Information

• Locus tag: Tpen_0646
• ID: 4601512
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermofilum pendens Hrk 5
• Kingdom: Archaea
• Replicon accession: NC_008698
• Strand: +
• Start bp: 595998
• End bp: 598124
• Gene Length: 2127 bp
• Protein Length: 708 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 639773418
• Product: hypothetical protein
• Protein accession: YP_920051
• Protein GI: 119719556

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.0000518672
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCAATG ACCCCAGACA GCCCGGCCGC GGGAGGACGG GGGAGGAGGG GGCCGAGGCG 
CAAGCAAAGA CTAGGCCTGG GGGAGAAACC CTGCAATCCC CTGCCGCTAA AATTGAATTT 
TTTTCCCGCG TGTCTAACCC AACCCTCCCA TCATTGGGGG CCCTCCCCGA CAGGGAGGGG 
TTCAATGAGC CCCGCGCGCG GGGAGGCCCG GCGCGGGGCG AGGGAGGCGT AGCCCGCGGG 
GAGCCCCGGG GTTACGCCTC TCCGGGGCCC AGTGAGCGCC CCGGGGTGGG GAGGCCCTCC 
CGGGCGCGAG GGGAGCGCTT GGCCGCGGGG AGGCCCGGGC CAGGCGCTCT AGACACGCGG 
GGGCGGCGGG GGAGGCGGGG CTCTGGGGCC CCAGCCCCGG GCTGGGGCGT CTCTCCCCGG 
TTGGGGAGAG ACCGGCCTAG GGGCCGATTC GTGAAGCCCG ACACGATGAG CCGAAAGGTG 
ACGGTCGCCC CTAGTAAACG ACGCCGGCCT TCCCGGGGGG CCGGGCAAAG GCGGGCGAGG 
CCTTGGCCCC AGCGGGCCCG CCCGAGAAAG CAATCACTTC GAAGCACTCA CCGCTCACGC 
CTCCCTCCCG CCACGCTGAC CCCTGATAGC GCGCCCTCGC GGGGCGCCCC ACCCGCCACG 
TGGAGGGTGG GTGATATGAG TGAGGCCTTG ATGAGGGGAA ATGGAGCCGT GGGGGAGGGG 
GTCGAGAAGA CTGTTAGGGA GGAGGTTTGG AGGCGTGCGG CTCTAAGCTT GTATGCCACC 
AGGACAGAGG ATAAGAGGAG GTCCAGGGGT AAGAAGAAGA AGGGCGAGAT ACACTACCGC 
GGCCTGCACG ATGCTGTGAC CGAGGTCGAC TGGGACTTTA CCAGGTTCGC GGCACACGCG 
CTGACCGTCG TGCCGGACGA CGTCTACCCG AGGTTTTACA GGTTCATCGA CATCGACGCG 
AGGAAGTACC TCTTGCTGAA CAGCGACGAG AGGCCACGCG AAGGAAGCGC TGTGACGGAG 
CTCAAAGGAA GGTTGCAAGC AATAGTCGAC GCCGGCGCCG ACGGTCTTAG AGCTGAGAAG 
CATGGCAGAG TCTGGCACGT ATACATACCT AGAGAGAACT GGTATGTCGT CGTGAGCAAG 
CCCACTAACG GCTGGTCCGT GCACGTACCG CTGAAGGGTT ACTGGGTTGA ATCAGAGTTC 
CCGGAGGTTC TCGTGAGGAC ACCACCAGAC GTGCTTAGAA GCCTGCAGAA AGGGTGGGTC 
TTAACGGATG TGACACCCCC TCGTGGACGC TTCAGCGACG TGAGTTTCGC CACGACGCAA 
CCGTGGCAAC TCCCCAGTAC GCTCGCAAGC TTTCCGAGCG ACGATATCAA GCTCGGCGTC 
ACGGCGGGCA TACTCGGCAG TACCAGGCTG AGCATCCAGT GGCACGCGCG TGTCTACGGC 
TACGAGGAGG CGCTCTCCTG GGCTTCAAGG CTTATCGGCG AAGTTAAACG TGCAGAGTTC 
CGCAGGTTGG TCGAGGAGTG CAAAGCGCTC AACGGCGACC CAGTGGCTCT TTTCACTGGC 
TTCTTGGGGG ACGGCGGGCT CGAATACTTT CTAAGGCTTA GATGGCTCTA CTTCAAGGTT 
GGACACGAGC TTCTCTACTT GCCGGCGGAG AGCGCCATTG TCAATGCTCG CTTGGCCGTG 
GAGAGGGCAA GCGAGTACGT GCGCTTTGTC TCGCTGGTAA CTAAGTGTCC GAAGGTCAAA 
CACTTCCTAT ACGTCGGCTA CGGGATGCTG CAGAAGAGGG GCAGGAAAAA CGGACAGAGA 
AATAACACGT TCTATGCCGA GGTAGCGGGA GCTAGGCTAC ACCTAGTCTA CATCTCTACG 
AAGAACCACG TCTACGCCCG TATCGCGGTC GAAGCTGTGC CTCAAGGCTG GGTGGAGGAG 
GCGCGCGCTC AAGGCTGGGA CGTCCGGGTG GTTAACATGG GAGGCAGGGA GTACTACCAG 
GTGACTCACA GTTCTCTCTT TGAACACGCG CGTAGCGACA CAGAGCTACG CGCAACACTC 
CTCGCCTTCG CGAAGCACAA GGCTGAGCAG TACCCCAAGG CGCAGAGCCT CGTAGAACGC 
CTCGAAAAAC TGGGGACAGA AGACTAA 

 

Protein sequence

MSNDPRQPGR GRTGEEGAEA QAKTRPGGET LQSPAAKIEF FSRVSNPTLP SLGALPDREG 
FNEPRARGGP ARGEGGVARG EPRGYASPGP SERPGVGRPS RARGERLAAG RPGPGALDTR 
GRRGRRGSGA PAPGWGVSPR LGRDRPRGRF VKPDTMSRKV TVAPSKRRRP SRGAGQRRAR 
PWPQRARPRK QSLRSTHRSR LPPATLTPDS APSRGAPPAT WRVGDMSEAL MRGNGAVGEG 
VEKTVREEVW RRAALSLYAT RTEDKRRSRG KKKKGEIHYR GLHDAVTEVD WDFTRFAAHA 
LTVVPDDVYP RFYRFIDIDA RKYLLLNSDE RPREGSAVTE LKGRLQAIVD AGADGLRAEK 
HGRVWHVYIP RENWYVVVSK PTNGWSVHVP LKGYWVESEF PEVLVRTPPD VLRSLQKGWV 
LTDVTPPRGR FSDVSFATTQ PWQLPSTLAS FPSDDIKLGV TAGILGSTRL SIQWHARVYG 
YEEALSWASR LIGEVKRAEF RRLVEECKAL NGDPVALFTG FLGDGGLEYF LRLRWLYFKV 
GHELLYLPAE SAIVNARLAV ERASEYVRFV SLVTKCPKVK HFLYVGYGML QKRGRKNGQR 
NNTFYAEVAG ARLHLVYIST KNHVYARIAV EAVPQGWVEE ARAQGWDVRV VNMGGREYYQ 
VTHSSLFEHA RSDTELRATL LAFAKHKAEQ YPKAQSLVER LEKLGTED