Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_0636 |
Symbol | ubiA |
ID | 4601433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | + |
Start bp | 588565 |
End bp | 589398 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639773409 |
Product | prenyltransferase |
Protein accession | YP_920042 |
Protein GI | 119719547 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATGCGC GTGTAAAGGC TTTCCTAAGG CTTTCCAGGA TAGAGCACGG AGTAATGTCA GGCTTGGCCG TTATAGCTGG GGCTTTGTCC ACACAAGTGT TTGTAGCCGA CAAGGCAGTG CTTGCTGCAC TATCGGCATT CTTCGCCGAA ACGTCGCTCT TCGCCTTTAA CGACGTCTTT AACGTGGAGG AGGACAAGGT GAATAACCCT ACGAGACCCA TAGTCGCTGG TGAGATTTCG CTCCGAGAGG CTCTTCTCTT TGCCATCGCC ACAGGAATAA TGTCGGTCGT ATTCGCGTCT GCAATTGGCC CGTTCCCCCT AGCGGTCATA GCCTTAGCCC TCGGGCTCGG AATACTTTAC GATGCCATGT TGAAGAGGCA CGGCTTCCTG GGAAACCTTA TAGTCGCGGG GCTGACGGCG TTTACATTCC CGTTCGGCGC AATAGCGGTG ACGGCTTCTC CAACAGAGAA ATCACTTCTC TTCTTTGCAG TAGCTTTTCT GGCAAACGTT GGCAGAGAAA TCGTAAAGGG TATCAGGGAC CTCGAGGGGG ACATGAAGGC GGGTATCTGC ACGTTGCCAT GTGAAGTAGG AGAAAAGCCT GCCGGCGTCA TCGCCGCTGC CTTCATGTCG CTGGCTGTTG TCCTCAGTTT TTCGGGTCTA GCGTTTGTAA GCTTAAAGCA CCTCTACCTC GCGCTTATAC TGGTAACGGA CGTCATCTTC GCTTATTCGG CAGCTGTGAT GGCTCTTAAG GCGGACAGGC ACCACGCGGA GGTTGCGAGA AGAATAACGT TGCCGGCAAT GCTCCTAGCA ATAGTAGCGT TCACGTTGCC GTAG
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Protein sequence | MHARVKAFLR LSRIEHGVMS GLAVIAGALS TQVFVADKAV LAALSAFFAE TSLFAFNDVF NVEEDKVNNP TRPIVAGEIS LREALLFAIA TGIMSVVFAS AIGPFPLAVI ALALGLGILY DAMLKRHGFL GNLIVAGLTA FTFPFGAIAV TASPTEKSLL FFAVAFLANV GREIVKGIRD LEGDMKAGIC TLPCEVGEKP AGVIAAAFMS LAVVLSFSGL AFVSLKHLYL ALILVTDVIF AYSAAVMALK ADRHHAEVAR RITLPAMLLA IVAFTLP
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