Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_0619 |
Symbol | |
ID | 4601325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | - |
Start bp | 575902 |
End bp | 576417 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639773393 |
Product | tRNA-splicing endonuclease subunit alpha |
Protein accession | YP_920026 |
Protein GI | 119719531 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1676] tRNA splicing endonuclease |
TIGRFAM ID | [TIGR00324] tRNA intron endonuclease |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTAGTAC TGGATCCTCT TCAAGGAAAC CAGTTGTACT TCAAAGGAGG TTTCTACGGA CGCTTCTTCA CGGTGCCCAA GCCGAAGCTC CCAGACGTAC GCAAAGAGCT AGAACTGTCT CTTTTCGACG CAATGTACCT TCTGGAACAG GGCTGCCTAG ACCTTAAAAG AGAGGACGGG AGCCCTGTTT CTCCCTCGGA GCTTTTCGAG CTTGCATCCA GAATCTATGA AAACTTCTAC GACGCTTATG CTGTTTACAA GGACCTGAGG GGAAGAGGCT ACGTAGTGAA GTCGGGAATG AAATTCGGTT CCACGTTTGC CGTGTACCAG TTCGGTCCCG GCATTGACCA CTCGATCTTC TTGGTGGATG TCTTGAAGTA TAACGACAAG CTTGACCCTA TACAGATCAT AAGGGCTGGG AGACTTTCGC ATTCCGTGAG GAAACACTTC ATACTCGCTT ATAGAGACCC GGTAGACGGA AAGATTCAAT ACTTCTCGTT TAGGTGGCTT ATGTAG
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Protein sequence | MVVLDPLQGN QLYFKGGFYG RFFTVPKPKL PDVRKELELS LFDAMYLLEQ GCLDLKREDG SPVSPSELFE LASRIYENFY DAYAVYKDLR GRGYVVKSGM KFGSTFAVYQ FGPGIDHSIF LVDVLKYNDK LDPIQIIRAG RLSHSVRKHF ILAYRDPVDG KIQYFSFRWL M
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