| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0616 |
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| Symbol | |
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| ID | 4601322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 572407 |
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| End bp | 573693 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639773390 |
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| Product | RNA modification protein |
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| Protein accession | YP_920023 |
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| Protein GI | 119719528 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01578] MiaB-like tRNA modifying enzyme, archaeal-type |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.776827 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCGAG TCTACATCGA GACCTTTGGC TGCTGGCTCA ATAAAGGAGA AAGCAACATA
ATGGCAACAC TGCTCAAGAG GAGAGGACAC AAGGTAGTAG AAAGTATCGA GAACGCAGAC
GTAGTCATAC TCAATACCTG TGCAGTTAGA GGAGACACCG AGACGAAAAT TTTCAGGAGG
CTAAGAGAGC TGGAAGAATT AAGGCAAAAG AGGGGGTTTA GGCTCGTAGT CAGCGGGTGC
CTCGTCAACG TACGCCCTAA GAGCATACTT GACGTCGCGC CCAGCGCTTC ACTAGTGGAG
CCCGACGCTA TCGAAAAAAT ACCCGAGGTT GTCGAATCCG AGGACAAGCT TCTCATCGTT
CGGCAGTATA AAGCTTCCCG AAACGTGCTT CCAGACTACA GCGGGGGGGC CGTCCACGTC
GTGCCAATAG AGAGCGGATG CCTCGGCTCC TGTGCTTTCT GCATCGAATG GGTTACACGG
GGTACCGGCG TTAAGAGCTA CCCGATCGAT GTGATAATTG AGAACGTGAG GGCCGCTGTC
TCTAAGGGTG CTAGGGAAAT CTTCCTAACA GGCCAGGACG TAGCAGCCTA CGGCTACGAC
TTGGGGACAA ACCTCTACGA GCTCGTGAAG AGGATACTTG AGGAGGTGGA CGGAGAGTAC
AGGGTTAGGC TCGGCATGAT GGAGCCCATG CTCTTGGGGA GGTTTCTCAA AAATCTCTTG
GAGCTTTTCA GAGACGAGAG GCTTTACAGG TACTTCCATA TCCCAGCGCA GTCTGGAGAC
GACAAAGTGC TGAGGCTCAT GCGGCGCAAA TACACAGTAG AGGAGTATAA GGGGATCGTG
AACACGATCA GAGGCTCAGG GTGGAAGTTC AGCATAGTCA CGGACATAAT AGTGGGGTTC
CCGGGAGAGG GTGAGGCGGA GTTTCAAAAT ACCCTAAAGT TCCTAAGGGA AGTAATGTTC
GACAAGGTGC ACGTTGCTCG CTACACGTTT AGGCCCTTTA CGGAGGGGTA CGTGATGTCG
GGTGTACCTG AGCCCGTGAA GAAGCAGAGG AGCAGGCTTG CCTCGAGGGT CGCCTTAGAA
GTCGCGTACG AGATAAACAG GAGCTACGTG GGAGAAGAGA GGGAAGTTGT AGTGGAGGGC
ACCTCTATCC GCGGAGACCT TGTTGGAAGA ACGATAGAGT ATAAGCCTGT CGTTATTAAG
GATCAAGAAG CAAGGGTCGG GGAGATAGTT AGAGTGAAGA TAGTCGACGC CACGCCGGTC
AGCCTAATAG GCAAAGTGCT TGCTTAG
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| Protein sequence | MARVYIETFG CWLNKGESNI MATLLKRRGH KVVESIENAD VVILNTCAVR GDTETKIFRR
LRELEELRQK RGFRLVVSGC LVNVRPKSIL DVAPSASLVE PDAIEKIPEV VESEDKLLIV
RQYKASRNVL PDYSGGAVHV VPIESGCLGS CAFCIEWVTR GTGVKSYPID VIIENVRAAV
SKGAREIFLT GQDVAAYGYD LGTNLYELVK RILEEVDGEY RVRLGMMEPM LLGRFLKNLL
ELFRDERLYR YFHIPAQSGD DKVLRLMRRK YTVEEYKGIV NTIRGSGWKF SIVTDIIVGF
PGEGEAEFQN TLKFLREVMF DKVHVARYTF RPFTEGYVMS GVPEPVKKQR SRLASRVALE
VAYEINRSYV GEEREVVVEG TSIRGDLVGR TIEYKPVVIK DQEARVGEIV RVKIVDATPV
SLIGKVLA
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