| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0615 |
|---|
| Symbol | |
|---|
| ID | 4601321 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | + |
|---|
| Start bp | 570688 |
|---|
| End bp | 572385 |
|---|
| Gene Length | 1698 bp |
|---|
| Protein Length | 565 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639773389 |
|---|
| Product | methionyl-tRNA synthetase |
|---|
| Protein accession | YP_920022 |
|---|
| Protein GI | 119719527 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0143] Methionyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGGTGATA AGGCTAGGCG CAAGTGGCTA GTACTCGCCG CGTGGCCCTA TGCGTACGGA
GTACCACACC TCGGTAACCT CATAGGCTCG GTGCTCTCGG CAGACGTTGC CGCTAGGTTC
CTGAGGTTAG CGGGGGATGA AGTGGTCTTC GTTTCTGGCT CTGACATGCA CGGTACGCCT
ATCGAGGTTG AAGCTTTGAA GCGGGGAGAA AGCCCCAAGG ATTTGGCGGA GCGGAACCAC
GAAAAAATTA AGGAGCTTTT CGAGAGGTGG GAGATAAGCT TCGATAACTA CTCTAAGACT
GAGAGTCCCA CGCACATAAA GTTCGTCCAG GATTTCTACA GGAGGGTCTA CGAAAACGGG
TACGTTTTCT CGGATACCGT GCAACTGTAC TACTGTCCTA AGGACAAGAT ATTTCTCCCC
GACCGCTACA TAGTAGGCAC GTGCCCGTAT TGCGGCTACG ACCGTGCATA CGGCGATCAA
TGTGAGAACT GCGGGCGCTT GCTCGAACCT ACCCTTCTCC TGAACCCCAG GTGTGCAATA
TGTGGGTCAA CGCCCGAGCT TAGGACTACT ACACACTGGT TCTTCGACCT TCCGAAGCTG
ACGGATGCCT TGAAGCGGTA CATCGAAGAA AACGAAAACC TCCCTCCAAA CGCGCGCAAC
ATGAGCCTCC AGATACTGAG GGACGGGTTA AAACCGCGAG CCCTCACACG AGACAACAAG
TGGGGCATAC CGGCACCCTT TCCTGGGGCC GAGGATAAGA CAATCTATGT TTGGATGGAG
GCAGTGCTAG GATACATCTC GGCTACAATA GAGTACTTCG CCTCGAAGGG AGAGCCGGAG
AAGTGGAAGG AGTTCTGGCT CGACCCGGAG ACGAGGAGCG TATACTTCAT AGGAAAAGAT
AACATACCTT TCCATACGTT GATCCTTCCA GCGTTGCTTA TTGCGAGCGG GGAGAAGTAC
GTTCTGCCGT GGACCGTGGC CTCCACGGAG TACTTACTCT TCAGGGGGTT GAAGTTCTCG
AAGAGTCGAA GGATTGGTGT CTGGATTGAC GAAGCGCTGG AAGTCTTCCC GGCGGATTAC
TGGAGATTCG TACTCGTCTC TCTTAGACCG GAGCAGAAAG ACATGAGCTT CACGTGGGAG
GAGTTCCTCA GAATAGTGAA CAACGACCTT AACGACAATA TTGGGAACTT TGTGCACAGA
GTGCTGGTGC TTGTGCAGAG AAAATTCGGA GGCATAGCGC CAGCTCCCCT GGACTTCGCA
GATGAGGACT TGAAGTTCAG GGAGGAGATC CTGGCGAGAT CCCGTGAAGT CGCGGAGTTC
ATGTACGCTT TTCGCTTCAA GGAAGCTTTA ACGCACATAC TATGGCTCTC CAGCTCGGGC
AACTCCTATC TCAACTTCCG GAAACCCTGG GAACTAGACT CCGAGTCTGC GAGAACCCCT
GCGTTCCTAG CCCTACACGC TGTCAAAGCA TTAGCAATAA TGCTCTATCC AATAATCCCC
AGGAGCAGCC AGGAGATGTG GAAGCTCCTA GGGTACAAGG ACGACATAGC GAATCACCGT
TGGCACGAGA TAAACGAAGC TGTACCGCCG GGTCAAGAAC TCCCAAGCCC GAGACCCCTG
TTCAGGAAGA TAAGCGAGGA GGAGCTGAAA GCAGCAGTGG AGAAGATCGA GGAGCTACGC
GCAAGCCGTA GCAGCTAG
|
|---|
| Protein sequence | MGDKARRKWL VLAAWPYAYG VPHLGNLIGS VLSADVAARF LRLAGDEVVF VSGSDMHGTP
IEVEALKRGE SPKDLAERNH EKIKELFERW EISFDNYSKT ESPTHIKFVQ DFYRRVYENG
YVFSDTVQLY YCPKDKIFLP DRYIVGTCPY CGYDRAYGDQ CENCGRLLEP TLLLNPRCAI
CGSTPELRTT THWFFDLPKL TDALKRYIEE NENLPPNARN MSLQILRDGL KPRALTRDNK
WGIPAPFPGA EDKTIYVWME AVLGYISATI EYFASKGEPE KWKEFWLDPE TRSVYFIGKD
NIPFHTLILP ALLIASGEKY VLPWTVASTE YLLFRGLKFS KSRRIGVWID EALEVFPADY
WRFVLVSLRP EQKDMSFTWE EFLRIVNNDL NDNIGNFVHR VLVLVQRKFG GIAPAPLDFA
DEDLKFREEI LARSREVAEF MYAFRFKEAL THILWLSSSG NSYLNFRKPW ELDSESARTP
AFLALHAVKA LAIMLYPIIP RSSQEMWKLL GYKDDIANHR WHEINEAVPP GQELPSPRPL
FRKISEEELK AAVEKIEELR ASRSS
|
|---|
| |