| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0613 |
|---|
| Symbol | |
|---|
| ID | 4601319 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | + |
|---|
| Start bp | 566537 |
|---|
| End bp | 568741 |
|---|
| Gene Length | 2205 bp |
|---|
| Protein Length | 734 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639773387 |
|---|
| Product | elongation factor EF-2 |
|---|
| Protein accession | YP_920020 |
|---|
| Protein GI | 119719525 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0480] Translation elongation factors (GTPases) |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G
[TIGR00490] translation elongation factor aEF-2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.472828 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCGGT ACAAGCAGGT ATCCGACATC GTAAAAATAA TGAGAAACGT AGAGCAAGTG
CGGAATATAG GTACGCTTGC ACACGTAGAC CACGGCAAGA CCACGACTTC CGACTCTCTG
TTAATGGGTG CGGGGATACT TAGCCCGAAG GCAGCTGGAC AGGCACTAGC ACTGGACTAT
GTAGAGATAG AGCAGCTCAG ACAAATGACA GTTAAAGCGG CAAACGTCTC GCTCTACCAC
GAGTGGGAGG GCAAACCCTA CGTCATTAAC CTGGTCGATA CGCCCGGACA CGTTGACTTC
ACGGGGCATG TGACTAGGAG CCTGAGGATG ATGGACGGAG GTATAGTCGT TGTAGATGCT
GTTGAAGGCG TAATGACGCA GACGGAGACC GTGGTTAGGC AAGCTCTCTC CGAGTATGTG
CGCCCCTTGC TCTACATAAA CAAGGTTGAC AGGCTGATAA AGGAGCTTAG GCTTGAACCC
AGGGAGATAC AGCAGAGGTT CGTGGAGATT GTCAAGGAGT TCAACGCGTT GATCGAGCTC
TACGCAGATA AAGAGTTCAA GGACAAGTGG AAGGTGGACT TTGCTAAAGG ACAGGTAGCC
TTTGGTAGCG CGTTACACAA GTGGGGCCTT ACAGTCCCCA TAGCGACTCA AAAAGGAGTA
AAGTTCGACT ATATCATCGA CGCTTACCTT AGAGACGAGA AGGATAAACT GGCAGAAGAG
TTTCCGCTTT ACGTAGCGCT ACTGGACATG GTCGTTGAGC ACATACCTAA CCCGCGGGAG
GCGCAGAAAT ACAGGGTTCC CAAGCTCTGG AAGGGAGACC TTAACAGCGA GATAGGTAAA
GCCATGCTGG AATGCGACCC GGACGGGCCT ACCGTTGTCG CTGTAAGCAA GATAACCGTA
GATCCACACG CTGGGCACGT CGCTACGGGC AGGGTCTTCT CTGGGACCGT AACGGAGGGA
CAGGAAGTCT ACCTGCTGAA CGCGAAGGAC TCTGCGAAGG TACTTCAGGT AGGGCTTTAC
ATGGGACCCT ACAGGGAGAA GACCGAGCAG ATTTCAGCCG GAAACATTGT CGCAATGCTG
GGACTAGACA AGGCGAGGGC GGGAGAAACC GTCGTTGACA TAAAGTACAA GGACGTGATG
ACTCCCTTCG AGCACCTAGC ATACGTTGCT GAGCCTGTAG TCACGATAGC TGTGGAGCCG
AAGAAGAGTA GCGACCTTCC GAAGCTCGTA GACGTTTTGA GGAAGCTCGC CATAGAGGAT
CCGACGCTAA AGGTGTACAT AAACCAGGAA ACCGGGGAGT ACTTGTTGAG CGGGGTTGGA
ACCTTACACC TCGAGATTAC CCTCTGGGAG CTTAAGCAAA GAACAGGAAT AGAAATAGTT
ACTTCACCGC CGATCGTGAG GTACAGGGAG ACTGTCCGCG AGAAAGGACA GGTATTCGAA
GGGAAGTCTC CGAACAAGCA CAACAAACTA TACTTCTACG TGGAACCGCT TAACGAGGAA
ACAATAAAGC TCATGCAGGA GGGCAAAGTA TACCCGGACC AGGACTGGCG CGAAAGGGCT
ACTCTGCTCA GGGAATACGC TGGATGGGAC ACCGACGAGG CACGCAATAT ATGGGACATC
GATGAGAACT TCAACGTCAT AGTAAACAAG ACAAGCGGTA TCCAATACCT CAGGGAAGTG
AAAGACACCA TTATACAGGG CTTCAGGTGG ACCATGGAGG CAGGACCCCT GGCACAGGAA
CCGGTAAGGG GTGTGAAGGT AGTTCTAGTA GATGCGGTGC TCCACGAGGA TCCAGCGCAC
AGAGGACCGG CGCAGATAAT GCCGGCTACA AAGAACAGTA TCATGGCATC CTTACTCTCC
GCGAAGCCCA CGCTTCTAGA GCCGATACTC AAGGTCGACG TGAAAGTGCC CACGCAGCAT
GTAAGCGGCG TACTAACCGT GCTTAACAGG CACAGGGGGA GAATACTCTC GATGGAGGAG
AGAGGCATGG TCATGCGGGT GCTGGCAGAG CTCCCCGTGG CAGAAAGCTT CAACATTGCA
GACGAAATGC GAGAAGCAAC TCAGGGTAGA GCCTTCTTTG CCTACGAGTT CTACAAGTGG
GCGCCGGTAC CATCCTCACA ACTCGAACAG ATAGCATTAG CAATCAGGGA GAGAAAGGGT
CTACCCAAGA AGCTACCAAC AATTGAGGAG TTCTTAGGAC CCTAA
|
|---|
| Protein sequence | MVRYKQVSDI VKIMRNVEQV RNIGTLAHVD HGKTTTSDSL LMGAGILSPK AAGQALALDY
VEIEQLRQMT VKAANVSLYH EWEGKPYVIN LVDTPGHVDF TGHVTRSLRM MDGGIVVVDA
VEGVMTQTET VVRQALSEYV RPLLYINKVD RLIKELRLEP REIQQRFVEI VKEFNALIEL
YADKEFKDKW KVDFAKGQVA FGSALHKWGL TVPIATQKGV KFDYIIDAYL RDEKDKLAEE
FPLYVALLDM VVEHIPNPRE AQKYRVPKLW KGDLNSEIGK AMLECDPDGP TVVAVSKITV
DPHAGHVATG RVFSGTVTEG QEVYLLNAKD SAKVLQVGLY MGPYREKTEQ ISAGNIVAML
GLDKARAGET VVDIKYKDVM TPFEHLAYVA EPVVTIAVEP KKSSDLPKLV DVLRKLAIED
PTLKVYINQE TGEYLLSGVG TLHLEITLWE LKQRTGIEIV TSPPIVRYRE TVREKGQVFE
GKSPNKHNKL YFYVEPLNEE TIKLMQEGKV YPDQDWRERA TLLREYAGWD TDEARNIWDI
DENFNVIVNK TSGIQYLREV KDTIIQGFRW TMEAGPLAQE PVRGVKVVLV DAVLHEDPAH
RGPAQIMPAT KNSIMASLLS AKPTLLEPIL KVDVKVPTQH VSGVLTVLNR HRGRILSMEE
RGMVMRVLAE LPVAESFNIA DEMREATQGR AFFAYEFYKW APVPSSQLEQ IALAIRERKG
LPKKLPTIEE FLGP
|
|---|
| |