Gene Tpen_0612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0612 
Symbol 
ID4601318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp565348 
End bp566295 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content55% 
IMG OID639773386 
Productribokinase-like domain-containing protein 
Protein accessionYP_920019 
Protein GI119719524 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.27452 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTGGGGAC TCAAAGTGGA CGTCTACTTG ATCGGTCACC TCACTGTGGA TATAGTCGTG 
GAAGGAGGAA ACATGAGGCG AAGCCTAGGG GGAACGGTCA CGTTTGGTTC GCTAGCCGCT
ATCAGGCACA ACGCAACGCC ACACGTCGTG TCGAAGGTTG GGAGAGACTT TCCCGACGAA
TACCTGATGT ACCTGGGCAG AAACAACGTC GACTTAAGCT ACGTGAGGCT TTCAAGGTAC
CTTCCTACGA CAAAGTTTAA GCTCGTGTAC AGGGAGGGAG GAGAGCGTGT CCTCTACCTC
CTCTCGAGGT GCGAGGATAT ACTGTCGAGC GACGTGCCTC TCGATAAGCT TAAGGGCAAC
ATAGCGGTGA TAGGCGCGCT TATAGGCGAA GTCCCACCTA GCGTCGTACA GGAGATATCC
GAGCACGCTT CTCTCGTTGT GAGCGATTTA CAAGGCTACG TAAGGAGGCA GTCCGAGGAC
AGGAGCATAG TGCTTGCATC GACCCCCGAG GCTAAGCTCC TCATCTCCCT CTCCGATGTT
GTACACGCAG AAGTAGCGGA GGCGAAGGCG GTCTTCGGGG ATCTTCCTCC GGCCGAGCTA
GCAAAGAGGA TCGTAGAGGG GGGCGCGGCG GTAGCCCTTG TAACGCTTGG CGCCGGTGGA
GCTTACGTGG CCACGAAGCA GAGAGTACTG TTCGTACCGA GCTTTCCTAC AAGAGTTGTC
GATAGAACAG GAGCCGGCGA CGTATTCACC ACAGTCTTTG CCATCGAGTA CCATAGGCTT
GGCGACTACA GAGAGGCAGC GGCCTATGCG ACAGCCGCTG TCTCCTTCCT GATTGAGAAG
CCGGGTCCCG ATGGACTCCG AAGCCGATGG GAGGTTAAGA GAAGAGCGGA GAAAATACTG
AATGAGATTA GGGAGTACCC TCTAGATGAG GATAGACGTT CAAGGTGA
 
Protein sequence
MWGLKVDVYL IGHLTVDIVV EGGNMRRSLG GTVTFGSLAA IRHNATPHVV SKVGRDFPDE 
YLMYLGRNNV DLSYVRLSRY LPTTKFKLVY REGGERVLYL LSRCEDILSS DVPLDKLKGN
IAVIGALIGE VPPSVVQEIS EHASLVVSDL QGYVRRQSED RSIVLASTPE AKLLISLSDV
VHAEVAEAKA VFGDLPPAEL AKRIVEGGAA VALVTLGAGG AYVATKQRVL FVPSFPTRVV
DRTGAGDVFT TVFAIEYHRL GDYREAAAYA TAAVSFLIEK PGPDGLRSRW EVKRRAEKIL
NEIREYPLDE DRRSR