Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_0612 |
Symbol | |
ID | 4601318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | - |
Start bp | 565348 |
End bp | 566295 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639773386 |
Product | ribokinase-like domain-containing protein |
Protein accession | YP_920019 |
Protein GI | 119719524 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.27452 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTGGGGAC TCAAAGTGGA CGTCTACTTG ATCGGTCACC TCACTGTGGA TATAGTCGTG GAAGGAGGAA ACATGAGGCG AAGCCTAGGG GGAACGGTCA CGTTTGGTTC GCTAGCCGCT ATCAGGCACA ACGCAACGCC ACACGTCGTG TCGAAGGTTG GGAGAGACTT TCCCGACGAA TACCTGATGT ACCTGGGCAG AAACAACGTC GACTTAAGCT ACGTGAGGCT TTCAAGGTAC CTTCCTACGA CAAAGTTTAA GCTCGTGTAC AGGGAGGGAG GAGAGCGTGT CCTCTACCTC CTCTCGAGGT GCGAGGATAT ACTGTCGAGC GACGTGCCTC TCGATAAGCT TAAGGGCAAC ATAGCGGTGA TAGGCGCGCT TATAGGCGAA GTCCCACCTA GCGTCGTACA GGAGATATCC GAGCACGCTT CTCTCGTTGT GAGCGATTTA CAAGGCTACG TAAGGAGGCA GTCCGAGGAC AGGAGCATAG TGCTTGCATC GACCCCCGAG GCTAAGCTCC TCATCTCCCT CTCCGATGTT GTACACGCAG AAGTAGCGGA GGCGAAGGCG GTCTTCGGGG ATCTTCCTCC GGCCGAGCTA GCAAAGAGGA TCGTAGAGGG GGGCGCGGCG GTAGCCCTTG TAACGCTTGG CGCCGGTGGA GCTTACGTGG CCACGAAGCA GAGAGTACTG TTCGTACCGA GCTTTCCTAC AAGAGTTGTC GATAGAACAG GAGCCGGCGA CGTATTCACC ACAGTCTTTG CCATCGAGTA CCATAGGCTT GGCGACTACA GAGAGGCAGC GGCCTATGCG ACAGCCGCTG TCTCCTTCCT GATTGAGAAG CCGGGTCCCG ATGGACTCCG AAGCCGATGG GAGGTTAAGA GAAGAGCGGA GAAAATACTG AATGAGATTA GGGAGTACCC TCTAGATGAG GATAGACGTT CAAGGTGA
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Protein sequence | MWGLKVDVYL IGHLTVDIVV EGGNMRRSLG GTVTFGSLAA IRHNATPHVV SKVGRDFPDE YLMYLGRNNV DLSYVRLSRY LPTTKFKLVY REGGERVLYL LSRCEDILSS DVPLDKLKGN IAVIGALIGE VPPSVVQEIS EHASLVVSDL QGYVRRQSED RSIVLASTPE AKLLISLSDV VHAEVAEAKA VFGDLPPAEL AKRIVEGGAA VALVTLGAGG AYVATKQRVL FVPSFPTRVV DRTGAGDVFT TVFAIEYHRL GDYREAAAYA TAAVSFLIEK PGPDGLRSRW EVKRRAEKIL NEIREYPLDE DRRSR
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