| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0608 |
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| Symbol | |
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| ID | 4601228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 562343 |
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| End bp | 562918 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639773383 |
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| Product | ribosomal protein L6 |
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| Protein accession | YP_920016 |
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| Protein GI | 119719521 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0097] Ribosomal protein L6P/L9E |
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| TIGRFAM ID | [TIGR03653] archaeal ribosomal protein L6P |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00292124 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGAGTGT TGCAGAAGAC GGAGAGTGTG CCTATACCGG AGGGCGTGAA GGTACACGTA
AACGGGAAAA GGGTCGAAGT GGAGGGACCT TTGGGCAAAG TGGAGAAGGA CTTTTCTCAC
GCTAGGAGGA TCTCGATACG CGTAGAGGGG AACTCCGTAG TTGTTGAGAC TTTCCACGCG
ACGAAGAAAG ACTATGCGCT CGTAGGCACT ATAGCCTCAA TAATAAACAA CATGATCATT
GGCGTCACGA AGGGCTACAG GTACAAGCTG AAGATAGTCT ACGCCCACTT CCCGATGAGC
CTAAAGGTTG AAAAGGATAA GATCATCATC GAGAACTTCC TAGGGGAGAG AGGCAAAAGG
ATAGCCGGGA TAATGCCTGG AGCCAAGGTG AAGATCGAGA AAGACGACGT AATAGTTGAG
GGTATAGACC TTGACGCCGT AGCCCAGACA GCCGCCAACA TACACCTAGC AACCCACCTG
CGCGGTAAGC GTGCGCTCAG CCCCCACGGC CGAGAAGGAA CAGGTCCAGG CATACTGGAC
GGTATCTACC TGTACGCCAT AGAGCACTTG AAGTAG
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| Protein sequence | MRVLQKTESV PIPEGVKVHV NGKRVEVEGP LGKVEKDFSH ARRISIRVEG NSVVVETFHA
TKKDYALVGT IASIINNMII GVTKGYRYKL KIVYAHFPMS LKVEKDKIII ENFLGERGKR
IAGIMPGAKV KIEKDDVIVE GIDLDAVAQT AANIHLATHL RGKRALSPHG REGTGPGILD
GIYLYAIEHL K
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