| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0603 |
|---|
| Symbol | |
|---|
| ID | 4601223 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | - |
|---|
| Start bp | 558165 |
|---|
| End bp | 558596 |
|---|
| Gene Length | 432 bp |
|---|
| Protein Length | 143 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639773378 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_920011 |
|---|
| Protein GI | 119719516 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0432] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00149] secondary thiamine-phosphate synthase enzyme |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGCAACT TCAAAGTAGT AGTCAGAGAA ATCTCCCTCA GCACTCGCAG GAAGCTAGAA
CTGATCGACA TAACGGCCCA GGTCGAGCGG GTAGCCGCGG AAAGCGGGAT ACGGAACGGT
GTTTGCCTCG TCTTCGCTCC TCACGCGACA GCCGCCATAA TAGCTAACGA GCACGAAGAG
GGATTACTGA AAGACATAGA GGGCAAGATT TCCGAGCTTT TCCCCGTAGA CCAGCCGTAC
CTACATAACC GGATAGACGA TAACGCCCAC GCTCATATAG CTTCCAGCTT TATCGGAGCC
TCGCTAGTGC TTCCAGTGGT GAATGGCAGG CTTCTCCGCG GGACATGGCA GAACATCTTC
TTGGTAGAGC TGGACGGCCC GAGATCCTCT CGTAAGGTTG TCGTGGAGGT TATGGGAGAA
AGCTCGGACT GA
|
|---|
| Protein sequence | MGNFKVVVRE ISLSTRRKLE LIDITAQVER VAAESGIRNG VCLVFAPHAT AAIIANEHEE
GLLKDIEGKI SELFPVDQPY LHNRIDDNAH AHIASSFIGA SLVLPVVNGR LLRGTWQNIF
LVELDGPRSS RKVVVEVMGE SSD
|
|---|
| |