| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0600 |
|---|
| Symbol | |
|---|
| ID | 4601240 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | + |
|---|
| Start bp | 553934 |
|---|
| End bp | 554833 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639773375 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_920008 |
|---|
| Protein GI | 119719513 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCATGC TGGCGCTACT CGTCGATGCA CTGGTCTACG GGAACCTTCT AGCCCTTCTC
TCGGTTGGAC TCTCGCTGAC GCTCTTGACG ACGGAGGTTT CGAATTTTGC TCACGGCGAC
TTCGCGGTTA TAGGCATCTA TATAGCCTAT ACGCTTAGCC AAGTTCTAAA CGTGACTCCC
TATGCTTTCA TCCCGGTAGC CTTTGCAGGC GGAGCGCTTG TAGGGCTAGC CGTTTACTTT
CTCGTCTTCG ATCCATTGCG AGACAAAGCC TCGTTTGTAA CACTCATGAT AGTCTCAATG
GCGCTTGAGT TCATACTGAG GTACAGCGTG CAGATATACG CTGACGTTAT GCAGAGATTG
TTGAAGACGT TCGGGAGAGG CTTCATGTTC AATGACGTTA GGCTAGCGTT GCTCGGTCTA
CACGTTGATG GCGTCGTTGT GTACTCGTCG ATCACTACTC TCTCTTTGCT CGTCCTGCTA
TACGTTTTCC TCTACAGGAC AAAGACGGGG ACCGCCATGA GGGCGGCTAT AGAGAATCCT
CAGCTGGCGC AGACCTTAGG GATAAACGTT AAGAAGGTTT ACGCGTACAG CTGGATGCTC
TCGGCGGGCT TTGCGGCAGC GGCGGGCGTT TTCCTACCCT TCAAGATAGT GGTAAACCCG
GATACTGGCT TCTCACTTCT CCTATCGATG TTCGCGGCAG TCACGGTGGG AGGCTTGGGT
AGCCTTGCGG GAAGCCTTGT AGGAGCCTAC CTTATCTCGT TTTCCGAGAT AGCTGCCACG
TACTTCCTCT CCTCCCTGGG GCTCAGCACG TCCTACAGGG CGCTCGTCTC CTTTTTGTCG
ATCGCCGTCG TGCTCCTTCT ATCCCCGAGA GGACTCGCCG GGCTGTGGAG CAAGAGGTAG
|
|---|
| Protein sequence | MLMLALLVDA LVYGNLLALL SVGLSLTLLT TEVSNFAHGD FAVIGIYIAY TLSQVLNVTP
YAFIPVAFAG GALVGLAVYF LVFDPLRDKA SFVTLMIVSM ALEFILRYSV QIYADVMQRL
LKTFGRGFMF NDVRLALLGL HVDGVVVYSS ITTLSLLVLL YVFLYRTKTG TAMRAAIENP
QLAQTLGINV KKVYAYSWML SAGFAAAAGV FLPFKIVVNP DTGFSLLLSM FAAVTVGGLG
SLAGSLVGAY LISFSEIAAT YFLSSLGLST SYRALVSFLS IAVVLLLSPR GLAGLWSKR
|
|---|
| |