Gene Tpen_0595 details

Gene Information

• Locus tag: Tpen_0595
• ID: 4601235
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermofilum pendens Hrk 5
• Kingdom: Archaea
• Replicon accession: NC_008698
• Strand: +
• Start bp: 550094
• End bp: 550534
• Gene Length: 441 bp
• Protein Length: 146 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 639773370
• Product: hydrogenase expression/synthesis, HypA
• Protein accession: YP_920003
• Protein GI: 119719508
• COG category: [R] General function prediction only
• COG ID: [COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression)
• TIGRFAM ID: [TIGR00100] hydrogenase nickel insertion protein HypA

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATGAAT GGAGTCTTAT GCAGGCAGTC GTAGAGGCTC TACTGGAGTT TGCCGGGAGA 
AACGGTTTTT CTCGCATAAG CAGGGTTGTT GTCGAAGTTA ACGAGGTCTC GCAACTCGAG 
GAAGATATCC TGCGAGAAGC ATATAGCGTT TTAACAGAGA ATACTATAGC CGAGGGTTCT 
ACGCTGGTTA TCGAGAAAGT CCCGGCGAGG TTTACCTGTA ACTCGTGCGG ATACACTTTC 
TCGCTTGAAG AAGCTCGGCG TGCACTTGAA AGGCTCGGCG AATACGCGAT TCCAGACGAA 
GAAGGAACGC TCGACATGCC TACTCACTAT ATACCGGCAG TTATTCACGG CTTTCTGCGG 
TGTCCCAGGT GCGGTAGCCG CGACATCTGG GCGGACATGA CTAGCTCCCT AAGGGTAAAG 
GCCGTCGAGG GTGAACGATG A 

 

Protein sequence

MHEWSLMQAV VEALLEFAGR NGFSRISRVV VEVNEVSQLE EDILREAYSV LTENTIAEGS 
TLVIEKVPAR FTCNSCGYTF SLEEARRALE RLGEYAIPDE EGTLDMPTHY IPAVIHGFLR 
CPRCGSRDIW ADMTSSLRVK AVEGER