| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0583 |
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| Symbol | |
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| ID | 4600698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 534317 |
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| End bp | 535024 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639773355 |
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| Product | putative RNA-associated protein |
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| Protein accession | YP_919991 |
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| Protein GI | 119719496 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1500] Predicted exosome subunit |
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| TIGRFAM ID | [TIGR00291] rRNA metabolism protein, SBDS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGGTA AGAGGAGGCT AAGCATAGCT AGGCTAGAGC GGGGCGGCAA GAGGTACGAG
ATAATAGTGG ACGTTGAAAA GGCTTGGCTC TACAAGAACG GAGAGAAACT GAACGTGAGG
GAAATAATGG AGGGAGAATT CATTTACTAC GACGCTAATA GGGGGTTAAA GGCCTCCGAG
TCGGAGCTGA AGAAAGTGTT CGGCACCGAC AACATTTACT CTGTTGCAGA GATAATTCTC
AAGCAAGGAG AGTTGCTTCT CACAACGGAG CAGAGAAGAG AGCTCATAGA GCAGAAGAAG
AGACAAATAA TAGAGCTTAT CTCCAGGAAC GCTGTAGACC CGCGGACAAA CGCCCCCATC
CCGGCTAAGC GTATCGAGCT AGCCCTCGAA GAAGCAAGGG TGAGCATCGA CCCCTTCAAG
CCGGCAGAGT TACAGGTACC TGACGTGATT AAAGCGCTTA GAATGACCCT CCCAATGAAG
ATAATGAAGG CTATAATGGC TGTCTACATA CCGGCCGCCT ACGTGGGTAA AGCTTACCAT
GCTGTGAGCA AGATGGGGAA GGTCCTAAGG GAAAACTACA GAAGCGACGG TTCGCTGGAC
TTGGAGATAG AAGTCCCAGC AGGGCTACAG TCCAGCATAG TTGAGAAAGT AGCGTCTCTG
ACTAAAGGTT CGGGGGACGT GAAGCTCATA CGTATGGAGC CCGTTTGA
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| Protein sequence | MSGKRRLSIA RLERGGKRYE IIVDVEKAWL YKNGEKLNVR EIMEGEFIYY DANRGLKASE
SELKKVFGTD NIYSVAEIIL KQGELLLTTE QRRELIEQKK RQIIELISRN AVDPRTNAPI
PAKRIELALE EARVSIDPFK PAELQVPDVI KALRMTLPMK IMKAIMAVYI PAAYVGKAYH
AVSKMGKVLR ENYRSDGSLD LEIEVPAGLQ SSIVEKVASL TKGSGDVKLI RMEPV
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